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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_28323A |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
|
| Family |
WRKY |
| Protein Properties |
Length: 255aa MW: 28109.2 Da PI: 6.6029 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_28323A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 27.7 | 5.5e-09 | 53 | 72 | 2 | 21 |
--SS-EEEEEEE--TT-SS- CS
WRKY 2 dDgynWrKYGqKevkgsefp 21
+Dgy+WrKYGqK++++s +p
Oropetium_20150105_28323A 53 HDGYEWRKYGQKMIRSSLYP 72
7****************998 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 255 aa
Download sequence Send
to blast |
MAKRDDSVTS SSSCSNGTHK RLLQDSSGYV QDQATNRKVH VSTRTEYTYA PYHDGYEWRK 60
YGQKMIRSSL YPSTVPCSPW EARKVHVPSG AWLPATKHVE QTNSQDPPLF RVVYTNEHAC 120
ISTDASSIHI QQMADASLRK AQAELVPSSL MTRRSAGHGE VIKEEEGAII VSSLLDVING 180
GRRDVATTSV GRYSVLSSSS TTVGRSSREE ASPSVSSVLL PASDKPEMDF VEPLESHWFE 240
PLDLGWFIES TRTD*
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