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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_28312A |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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| Family |
Nin-like |
| Protein Properties |
Length: 329aa MW: 37439 Da PI: 9.7984 |
| Description |
Nin-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_28312A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | RWP-RK | 80.3 | 2.1e-25 | 203 | 252 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
++i+l +++k+F+lpi++A+k+L++++++LK++CR+yGI+RWPhRkiksl
Oropetium_20150105_28312A 203 ESITLVEIAKCFHLPIREASKTLKIGVSILKKKCREYGIPRWPHRKIKSL 252
689*********************************************97 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MDAAVSTLTA LAIFESTVER GVVRSVHGYR VVGRKAGVGW VRWERWVERG FVLSADGSRE 60
VGVPPDAPRI LQAGWRSRPA FREGQTVGDW RCIVAFDSVA AVKPXXXXXX XXXXTGNPQL 120
KCLPNLYNDL EKVFQFQSVE NLPQLIHSDS EEQQQSIHSG ERDNISDETD YASGCYSDED 180
PQSGSELVPP VQRYRRAKRG HIESITLVEI AKCFHLPIRE ASKTLKIGVS ILKKKCREYG 240
IPRWPHRKIK SLDSLIHDVE SVLGDQARDD VEQKKYAFAI GALTKRKRML EREKENIRQK 300
PASDLLTETK QFREDVFKRR NRARRGRD*
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