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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_27873A |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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| Family |
MYB_related |
| Protein Properties |
Length: 386aa MW: 42174.7 Da PI: 7.1621 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_27873A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 24 | 9.3e-08 | 314 | 345 | 1 | 32 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32
+++W++ +++l ++v+++G+g+Wk I +
Oropetium_20150105_27873A 314 KKKWSKMQEKILQEGVEKYGKGNWKDIKMAYP 345
689***********************976655 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 386 aa
Download sequence Send
to blast |
MTFSPAHTPS RIGTGGTATQ GNATPPMATA AFLVLEFVAG NGRIPHSVFA ALLAALPLPF 60
PRDSPRLRKA LALRALDAAL HHEDAASTAL LLLRKARVIL ADPDMASCFP QPLVFSLLDD 120
KDDDEVTAAA AMADLKRILD HEWASLPLST LEIAADRLAG AGALEMWARA DGSKRRKLRL 180
LVGDSIEREI VTKLGQDAYD RTSGNETDHV QGDGEADLST ENNESEYAQV THAQPQHESI 240
KGAGKGKVLD TPLVMDTSTF HVPEQSAPGN AESHRFAACN LNPMHSDDER PLRHRRLPPF 300
ERKPKPSTVS QTTKKKWSKM QEKILQEGVE KYGKGNWKDI KMAYPGIFED RSTVCRFEGQ 360
VQKYGKTSIY VRPAYLSSSG TWESN*
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