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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_25988A |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
|
| Family |
G2-like |
| Protein Properties |
Length: 194aa MW: 21618.8 Da PI: 7.7089 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_25988A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 95.6 | 3.7e-30 | 45 | 95 | 1 | 51 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51
++rlrWt+eLHerFveav+qLGG+++AtPk +l++m+v+gLt++hvkSHLQ
Oropetium_20150105_25988A 45 RQRLRWTNELHERFVEAVTQLGGPDRATPKGVLRIMSVPGLTIYHVKSHLQ 95
58************************************************* PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 194 aa
Download sequence Send
to blast |
MYQPNPISNI GTSQSNPSAH EQMEIGASAL APHNGGNNNT NMAARQRLRW TNELHERFVE 60
AVTQLGGPDR ATPKGVLRIM SVPGLTIYHV KSHLQCNSFL WFTQLTSTYV DNKEEKKDAG 120
DLLATLEGSS GMQISEALKL QMEVQKRLHE QLEVXXXXXX XXXXXXXXXX XXXXXXXGMH 180
VFCLRGNSLV TKI*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 2e-21 | 45 | 95 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 2e-21 | 45 | 95 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_A | 2e-21 | 45 | 95 | 1 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 2e-21 | 45 | 95 | 1 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 2e-21 | 45 | 95 | 1 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 2e-21 | 45 | 95 | 1 | 51 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 2e-21 | 45 | 95 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 2e-21 | 45 | 95 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 2e-21 | 45 | 95 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 2e-21 | 45 | 95 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 2e-21 | 45 | 95 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 2e-21 | 45 | 95 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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