 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_25911A |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
|
| Family |
G2-like |
| Protein Properties |
Length: 245aa MW: 27286.3 Da PI: 8.444 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_25911A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 35.2 | 2.7e-11 | 36 | 72 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
prlrWtpeLH +F++a lm+vkgL++ hvkSHLQ+YR+
Oropetium_20150105_25911A 36 PRLRWTPELHLCFLRA-----------------LMNVKGLSIGHVKSHLQMYRS 72
89***********877.................5*******************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 245 aa
Download sequence Send
to blast |
MEESSKGTVD IAGGDSSRIR KTSSSSVRPY VRSKNPRLRW TPELHLCFLR ALMNVKGLSI 60
GHVKSHLQMY RSKKIDDSGQ VIAGLWRNQL QEGGQAYNLR HLSLHHAQTD SGTILHRHGI 120
GSKPYYYYYY STVDAGPLLR ARTPYAARAT TASSIPTTTF PQEYSSSQND QITNDHRRRI 180
FKKEDGNDDP LDLELALNIG PPRRENEEEE IRFCSCGKQG DDNGGDQEVE STATGALSLS 240
LFPS*
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT037957 | 3e-33 | BT037957.1 Zea mays full-length cDNA clone ZM_BFb0204N03 mRNA, complete cds. |
| GenBank | BT068440 | 3e-33 | BT068440.1 Zea mays full-length cDNA clone ZM_BFb0191O11 mRNA, complete cds. |
