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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Oropetium_20150105_24256A |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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Family |
ERF |
Protein Properties |
Length: 134aa MW: 15377.4 Da PI: 4.9842 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Oropetium_20150105_24256A | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 25.4 | 3.5e-08 | 15 | 62 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr + +grW+A+ +se +g +g+f + eAa a+++ ++ l g
Oropetium_20150105_24256A 15 YRGVRLEP-DGRWAAH---VSEgDG--EGRFIGHFRKELEAALAHDRVALFLLG 62
9*******.9******...888666..77788*****99*********999876 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 134 aa
Download sequence Send
to blast |
MSTVAAATPT PSRLYRGVRL EPDGRWAAHV SEGDGEGRFI GHFRKELEAA LAHDRVALFL 60 LGGAPTINFP PSFSIMERRF LRLCCTEAFV FRAVLDETYD VEYEFFLHDE FDTYLCPYVR 120 WRGEDSAWWL VEH*
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