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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_22457A |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
|
| Family |
NAC |
| Protein Properties |
Length: 256aa MW: 28380 Da PI: 9.5206 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_22457A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 53.1 | 1.1e-16 | 20 | 164 | 6 | 128 |
NAM 6 rFhPtdeelvveyLkkkvegkk..leleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkya....tgkrknrat 78
+ hP d el++ yL++ v++++ ++ ++i+ ++y+ +P++L + ++++e+ wyf s+ ++k++ g r r++
Oropetium_20150105_22457A 20 ERHPCDLELIQAYLRPWVNSRRtaPPAVSCIHAENVYSEDPEKLTRryapaVARNGEHAWYFLSRLRTKANgicdFGARFARTV 103
559****************99976566678**************8446675555677899999998888776655588****88 PP
NAM 79 k..sgyWkatgkdkevlsk...kgelvglkktLvfy......kgrapkgektdWvmheyrl 128
+ g+Wk + ++++ ++++ g +++L + +g ++ g+ t W+m+e rl
Oropetium_20150105_22457A 104 EngLGRWKIRPGQMAIVDVfddHRRQFGRRRSLHLMyekveeRGGKRVGTWTGWIMEELRL 164
823466**887777777766669999*******98778887778889999********987 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 256 aa
Download sequence Send
to blast |
MASGDDDNDA KSPPRAVDFE RHPCDLELIQ AYLRPWVNSR RTAPPAVSCI HAENVYSEDP 60
EKLTRRYAPA VARNGEHAWY FLSRLRTKAN GICDFGARFA RTVENGLGRW KIRPGQMAIV 120
DVFDDHRRQF GRRRSLHLMY EKVEERGGKR VGTWTGWIME ELRLGIELGR SGRDVDLCAL 180
CKVYRSSHHP ARPSDGAPAV EAVVAGPEEG DGSSANTASE TQELGAGMIP LAAAFGRLRA 240
RGGRRGQRRQ VCRAA*
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