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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_20580A |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
|
| Family |
GATA |
| Protein Properties |
Length: 252aa MW: 27209.6 Da PI: 6.8936 |
| Description |
GATA family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_20580A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GATA | 37.4 | 3.6e-12 | 200 | 237 | 1 | 36 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkglk 36
C nC++++ Tp++Rrgp+g +t CnaC l+++k++++
Oropetium_20150105_20580A 200 CDNCRASSevTPMMRRGPNGCRTFCNACELMWAKTRKM 237
9*********************************9986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005515 | Molecular Function | protein binding |
| GO:0008270 | Molecular Function | zinc ion binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 252 aa
Download sequence Send
to blast |
MQQPPAPPSS SFSAGAGGGE AEADPFDDYD IVIPPDFLME LDHNDGGAAA LEEDARMGGG 60
GSCNGGGCAE DDDRLSLAYK GFSYVFDSVP PQKVVTILAL LNGLDIAPQS TRRPQLTHLP 120
IVVPQDFDRT AAVSRYREKR KTTLKFDVKA DYSIRREIAS RIARRRGKFV STDKKPDEPA 180
AAASAHHNPQ AEATELALFC DNCRASSEVT PMMRRGPNGC RTFCNACELM WAKTRKMRDL 240
TGPPRGGYGG R*
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