 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_19457A |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
|
| Family |
CPP |
| Protein Properties |
Length: 150aa MW: 16239.6 Da PI: 7.3729 |
| Description |
CPP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_19457A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | TCR | 23.7 | 9.4e-08 | 13 | 48 | 5 | 40 |
TCR 5 gCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
+CnCk s C ++ C+Cf + +Cs+ CkCe C+N+e
Oropetium_20150105_19457A 13 SCNCKTSLCCQLQCSCFRKLWHCSDACKCECCRNTE 48
7*********************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 150 aa
Download sequence Send
to blast |
MVAMDMDVDP RPSCNCKTSL CCQLQCSCFR KLWHCSDACK CECCRNTEAY EAFVEECAEI 60
ILKKTPRAFQ RKGGCGCLKV ACSKTSAAAS RQGNPPPAPA PVSSPEPGGV LGEMPVPRVC 120
QHARSKESNS DPSAFYKSFL DEECFSQNI*
|
| Best hit in Arabidopsis thaliana ? help
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| Hit ID |
E-value |
Description |
| AT3G04850.1 | 1e-06 | Tesmin/TSO1-like CXC domain-containing protein |
