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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_19338A |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
|
| Family |
G2-like |
| Protein Properties |
Length: 272aa MW: 29769.8 Da PI: 9.2161 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_19338A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 107.2 | 9.1e-34 | 22 | 76 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprlrWtp+LHerFveav++LGG++kAtPk++l+lm++kgLtl+h+kSHLQkYRl
Oropetium_20150105_19338A 22 KPRLRWTPDLHERFVEAVTKLGGPDKATPKSVLRLMGMKGLTLYHLKSHLQKYRL 76
79****************************************************8 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 272 aa
Download sequence Send
to blast |
MERAGYGAAG PMGGVVLSRD PKPRLRWTPD LHERFVEAVT KLGGPDKATP KSVLRLMGMK 60
GLTLYHLKSH LQKYRLGKQN KKDTGLEASR GAFAAQGINF SAPAPPSIPS AACNSTGETP 120
LADALKYQIE VQRKLHEQLE VQKKLQMRIE AQGKYLQTIL EKAQSNLSYD ATGASNLEAT 180
RSQLTDFNLA LSGFMDNVTQ VCEQNSGELA KAMSDDSIRT TNLGFQLYHG GQDVEDVKYT 240
PDDGLLLLDL NIRGGYGHRP SSDLKINQHM R*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 2e-21 | 22 | 78 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 2e-21 | 22 | 78 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 2e-21 | 22 | 78 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 2e-21 | 22 | 78 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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