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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_18122A |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
|
| Family |
G2-like |
| Protein Properties |
Length: 385aa MW: 40441.6 Da PI: 8.2307 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_18122A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101.2 | 6.5e-32 | 245 | 300 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56
k+r++W+peLH+rFv a+++LGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
Oropetium_20150105_18122A 245 KARRCWSPELHRRFVAALQRLGGAQVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 300
68****************************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 385 aa
Download sequence Send
to blast |
MGPAVRTMTE DVRALAARAA TDSLRAAAAR AGSGSSADRA ARFEECVRGL EAEKAKMEVF 60
RRELPISVRL VADVIEXXXX XXXXXXXXXX XHRAAPGLFA PAAAKRXXXX XXXXXXXDKR 120
SWMSSAQLWS CGSTHDDSTA NSNGGGGGAD KIKPAAHKAS NAFVLPALAT ALPPSDDAAE 180
KPAAAAAAAV PVVVPDLSLS SPAIDGGACP AAPSAASSAV TTDAAGAXXX XXXXXXXXXX 240
XXXRKARRCW SPELHRRFVA ALQRLGGAQV ATPKQIRELM KVDGLTNDEV KSHLQKYRLH 300
TRRASSDGSD QQAAMALWSS APDQQYTTSQ HSTSLSGSPQ GPLQLTVSSR AATGGDSCDG 360
DEEDGKSESY GWEMQQGATK TSSS*
|
| 3D Structure ? help Back to Top |
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| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 7e-14 | 245 | 298 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 7e-14 | 245 | 298 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 7e-14 | 245 | 298 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 7e-14 | 245 | 298 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
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