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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_17734A |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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| Family |
Nin-like |
| Protein Properties |
Length: 257aa MW: 28087.6 Da PI: 9.2546 |
| Description |
Nin-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_17734A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | RWP-RK | 72.6 | 5e-23 | 15 | 61 | 4 | 50 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50
++s e++sk Fslpi++AA+ Lgvc++vLKriCR +GI RWP+Rk+
Oropetium_20150105_17734A 15 SLSYEEISKLFSLPIAEAASILGVCTSVLKRICRSHGIVRWPYRKLV 61
6899*****************************************96 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 257 aa
Download sequence Send
to blast |
MASNAPAQPK PTRVSLSYEE ISKLFSLPIA EAASILGVCT SVLKRICRSH GIVRWPYRKL 60
VSGKAGDDPK NSEREKANKE LLEFSKAAKQ KPFSSSGPSA IHTDSAALAK DVSHESATHD 120
ASKGLTDDEL DWGADEGEGE ADGIVTRAEP SAQLCSLRRK AVDDGRKLLN GGARRGQQEF 180
SRLNKRQKVV LAQVFGASLP EEFVSSFAFS RASSALLHWR ERDRKIRFCT LRRADFWNRE 240
DVVDSEAAAA VAKFLD*
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