 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_17625A |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
|
| Family |
TALE |
| Protein Properties |
Length: 454aa MW: 49358.5 Da PI: 7.1793 |
| Description |
TALE family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_17625A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 27.2 | 6.6e-09 | 393 | 430 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54
Fe+ +yp+ +e+e LA++ gL+ +qV++WF N R +
Oropetium_20150105_17625A 393 FENflRPYPKDNEKEMLAARSGLSRSQVSNWFINARVR 430
6665689*****************************88 PP
|
| 2 | BELL | 21.7 | 5e-08 | 266 | 330 | 5 | 69 |
BELL 5 lqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaia 69
++k ++ Ll+ll+ +d+ +q+ +++q+ +s + ++ g ++ + +A +a+S +r L+ +i+
Oropetium_20150105_17625A 266 HHKLRNDLLKLLQLMDQLCNQWLDEMQAAASKYGSMVSPGGGALSAPFAHNAVSTMHRRLRARIV 330
556678899999999***********************************************997 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0008285 | Biological Process | negative regulation of cell proliferation |
| GO:0009640 | Biological Process | photomorphogenesis |
| GO:0010073 | Biological Process | meristem maintenance |
| GO:0010227 | Biological Process | floral organ abscission |
| GO:0010228 | Biological Process | vegetative to reproductive phase transition of meristem |
| GO:0010371 | Biological Process | regulation of gibberellin biosynthetic process |
| GO:0090470 | Biological Process | shoot organ boundary specification |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 454 aa
Download sequence Send
to blast |
MTGNASCQQF GVDVMMSSSC FVSNMVGADA AMVQVPEYMP HDGGWGFGGF LADDRAVLAG 60
PLQLVRATAP PEEAHGAYNV AGGYGPSPSD VTVALPAKLV GEPERSWTHE QYYSPTWFFS 120
GDGFRDPFTA AARELSLRLA AESSSTGTVV NLPADQSSDV SCSGLTHASS NAGHGLFQPP 180
YFGGGEQGAR PGRPHFSQVL SRSGYAHIVQ QTLDEFVGRV LQDVAGATGT VVGEAANCPL 240
PSSSSSMTTP SSQSVVVFPS AEERPHHKLR NDLLKLLQLM DQLCNQWLDE MQAAASKYGS 300
MVSPGGGALS APFAHNAVST MHRRLRARIV AESQRTWEHS SSASLAERER SWESAFIQKH 360
WALRQLRRAD QQSWRPQRGL PVKSVAVLKA WMFENFLRPY PKDNEKEMLA ARSGLSRSQV 420
SNWFINARVR LWKPMIEEMY EDLKKATAAP LNI*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT083755 | 1e-119 | BT083755.1 Zea mays full-length cDNA clone ZM_BFb0035M24 mRNA, complete cds. |
