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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Oropetium_20150105_16305A |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
|
| Family |
G2-like |
| Protein Properties |
Length: 366aa MW: 39324.5 Da PI: 5.4977 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_16305A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 90.1 | 1.9e-28 | 305 | 355 | 1 | 51 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51
k+rlrWt eLHerFveav++L G+ekAtPk +l+lmkv+gLt++hvkSHLQ
Oropetium_20150105_16305A 305 KARLRWTLELHERFVEAVKKLDGPEKATPKGVLKLMKVEGLTIYHVKSHLQ 355
68************************************************* PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 366 aa
Download sequence Send
to blast |
MEHTDHKSSA GSTMSSWSAV AMEQITHPDT TVHATTSTQP LLHKLFDSKL GQQGGVNDIL 60
SSTSRPSNIK TELMRSSSLS KSLTLNLQKS SPESDPESPL SHVSHPNFSD PIPSNSSTFC 120
TSLFSSSLGK PEPSRQIGTL PFLPHPPKCE QQVSAGQSSS SSQLLSGDIG NSIDEDEHSG 180
DLKDLLNFSG DGSDGNYKAE HSDDLKDLLN LSGDGSDGSY HGENNALAFA EHMEFQFLSE 240
QLGIAITDNG ESPRLDDIYG TPPQFSSLPV PVSSCSNQNI ENSGSPVKVQ LSSSRSSSGS 300
AATNKARLRW TLELHERFVE AVKKLDGPEK ATPKGVLKLM KVEGLTIYHV KSHLQLLYFC 360
LPFVI*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 1e-22 | 305 | 355 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 1e-22 | 305 | 355 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 1e-22 | 305 | 355 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 1e-22 | 305 | 355 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 1e-22 | 305 | 355 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 1e-22 | 305 | 355 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 1e-22 | 305 | 355 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 1e-22 | 305 | 355 | 2 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor involved in phosphate starvation signaling (PubMed:26082401). Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes (PubMed:26082401). Functionally redundant with PHR1 and PHR2 in regulating Pi starvation response and Pi homeostasis (PubMed:26082401). {ECO:0000269|PubMed:26082401}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated under Pi starvation conditions. {ECO:0000269|PubMed:26082401}. |
