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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Oropetium_20150105_15822A |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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Family |
ERF |
Protein Properties |
Length: 390aa MW: 41360.1 Da PI: 11.2744 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Oropetium_20150105_15822A | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 38.3 | 3.4e-12 | 35 | 82 | 2 | 51 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51
+y+GVr++ grW +eI p++ g + r++lg++ t e+Aa a++a ++
Oropetium_20150105_15822A 35 KYRGVRQRF-FGRWGVEINNPTTAG-NHRVWLGTYETREQAACAYDAVAR 82
7********.9*********99955.6*******************9886 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 390 aa
Download sequence Send
to blast |
MEGGGGLRGF ARWAAAKIVA ARDAEGKPPS LPRWKYRGVR QRFFGRWGVE INNPTTAGNH 60 RVWLGTYETR EQAACAYDAV ARTVQQRPRA NLPDPGNEAV RVAVVHAHII DANQKRKRRF 120 RIDEVIRQEA ANMAAARGAV LTAVHPPPAP VAPAGDVLVE SHDKSQRKRK AAGVLENVAP 180 RAVSAVHPPP APAPAGGASA SRSASWAPVG RAEPALLAPV FAPTPLAYCF PEDIGAPPPP 240 AGFHKIAPSP GSIKNISPAA APSPLAPVAP AASWSVHVPD PSRLAFRHFL NTAAATPPPN 300 PSSPLHRAPA PAAGAVPLTP QENREFVARF AALNRSSELR DLHFHNMHRR ARPPVFRAQQ 360 PAPAVVSTVG KPFDLNMPPP LDTDDGHCT*
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