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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_15111A |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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| Family |
NAC |
| Protein Properties |
Length: 228aa MW: 25180.8 Da PI: 9.7329 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_15111A | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 59.3 | 1.3e-18 | 12 | 136 | 1 | 127 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvka.eek.ewyfFskrdkkyatgk.rk.nratk 79
+p+Gf+F Pt el+ +yL++ v+gk+++ ++ + +d+y+++P L +++++ + + wyf + ++ k+ +++ + +r+
Oropetium_20150105_15111A 12 VPAGFHFTPTLAELIRCYLNPWVAGKPVDKSTGlVCLADVYSADPDALTRRFRQwGYRgVWYFLCVARWKAGNKRkKFsRRVEG 95
589************************88866647777**********965555333448999999998888644133155888 PP
NAM 80 sgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyr 127
g W+ g++k+v + gl + L f ra+ + kt W+m+e +
Oropetium_20150105_15111A 96 GGAWRGIGTSKPVGR------GLGQRLGFE-YRAKWSAKTVWIMEEIS 136
99***********88......566667774.5788889*******976 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 228 aa
Download sequence Send
to blast |
MQELMPALRP SVPAGFHFTP TLAELIRCYL NPWVAGKPVD KSTGLVCLAD VYSADPDALT 60
RRFRQWGYRG VWYFLCVARW KAGNKRKKFS RRVEGGGAWR GIGTSKPVGR GLGQRLGFEY 120
RAKWSAKTVW IMEEISTSLA AAADGVGVKV VCKVYHPRKK DSSAAVAAAD PDEEEETNEI 180
GCKRPASDEY DEEAVRKRAK MDGLDECPAA TRSAITTHQM GMRRPPT*
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