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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_13834A |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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| Family |
MYB_related |
| Protein Properties |
Length: 211aa MW: 23314.3 Da PI: 6.507 |
| Description |
MYB_related family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_13834A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Myb_DNA-binding | 38.5 | 2.6e-12 | 32 | 87 | 4 | 48 |
S-HHHHHHHHHHHHHTTTT............-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 4 WTteEdellvdavkqlGgg............tWktIartmgkgRtlkqcksrwqkyl 48
T++Ed lvd++++ Gg+ + +I+++++ gRt++++k++w+++l
Oropetium_20150105_13834A 32 CTPDEDIALVDYITRNGGHgnwgrlpklaglNRCAISKELP-GRTDNDIKNHWNSHL 87
59******************888888888888888888888.************986 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 211 aa
Download sequence Send
to blast |
MRRPPYRCFR DDEEAKDVEA EMYGPTLKKG PCTPDEDIAL VDYITRNGGH GNWGRLPKLA 60
GLNRCAISKE LPGRTDNDIK NHWNSHLSKQ LLAMGIDPRT HMSIPDSLHP DFLKLQADAA 120
NFFVKLQSRS TIKSGHQICP NNVTNWTAPL YEEVSSLQPT YYGAAGEQSD AMAVPQQIFE 180
SSDAAMPAWN ISMNTVQQAS IIAVSIARSN *
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