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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_12792A |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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| Family |
Nin-like |
| Protein Properties |
Length: 279aa MW: 29707.4 Da PI: 8.9085 |
| Description |
Nin-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_12792A | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | RWP-RK | 70.8 | 1.9e-22 | 17 | 63 | 4 | 50 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50
+s e++sk Fslpi++AA+ Lgvc+ vLKriCR +GI RWP+Rk+
Oropetium_20150105_12792A 17 ALSYEEISKLFSLPIAEAASILGVCTNVLKRICRTHGIVRWPYRKLV 63
5899*****************************************96 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 279 aa
Download sequence Send
to blast |
MASNASAQPK PKPTRVALSY EEISKLFSLP IAEAASILGV CTNVLKRICR THGIVRWPYR 60
KLVSGKAGDD SKNSEREKAK ELLELSKAGK QKPFSSSGPS AMSSSSSQAA AKSQHGVSKT 120
GQISPPGKQN ASSGLALVSQ TRGIPTFMDE FKHGFPSSGL SCETLKWWGE SSHLDSAAPA 180
KDVNHEPETH DASKGMTDDE LDWGADEEGE ADGTVTAAEP SAQLCSLRRK AVDDGRKLLN 240
GDAYRGQQVF SRLNKRQKLV LAQVFGASLP VELNSVVV*
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