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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Oropetium_20150105_10425A |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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Family |
GeBP |
Protein Properties |
Length: 381aa MW: 40902 Da PI: 5.1852 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Oropetium_20150105_10425A | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 112.3 | 3e-35 | 83 | 182 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfs 81
lfqrlw+eeDeiv+L+G+ +f+a +g+ +++ d+d fye +++++++++sksqlveK+rrLK+K++++v++ ++sg+ +sf+
Oropetium_20150105_10425A 83 LFQRLWTEEDEIVILRGFAEFTAARGTafASHQyDTDPFYEDMRRRLQLDFSKSQLVEKLRRLKRKYRNCVSRlRDSGDAFSFR 166
79************************99877778***************************************8999******* PP
DUF573 82 kehdqkifelskkiWg 97
++h+q ife+++ iW+
Oropetium_20150105_10425A 167 SPHEQAIFEIARNIWR 182
***************8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 381 aa
Download sequence Send
to blast |
MPPTGDDPST AAAATGISFP DADGGGDSED GDFPDVHLLD PSEPGPPNPA TSSATVLPHA 60 VPAGGSGGGG PVNSGNGGER RPLFQRLWTE EDEIVILRGF AEFTAARGTA FASHQYDTDP 120 FYEDMRRRLQ LDFSKSQLVE KLRRLKRKYR NCVSRLRDSG DAFSFRSPHE QAIFEIARNI 180 WRPANKHGRD PSADSDDEDA VAAAAGTAVP GNTSPNGEVK SPSSGKQRRR KRGTEIATAA 240 GTAPAIMGQP PQPVQLSVSV PVKMEDSLPA LTQTPMPVTV TMDNSEPLSL PVISPQPGVM 300 DVEKNTLTPL LKEMIRAMIN VGANPFGAKL PELPLGLPME GEKWRKQRIL ELEVYLKRIE 360 LLQDQVKATL EELKSSTPGT *
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT5G28040.1 | 4e-42 | DNA-binding storekeeper protein-related transcriptional regulator |