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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Oropetium_20150105_10166A |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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| Family |
G2-like |
| Protein Properties |
Length: 336aa MW: 37388.9 Da PI: 7.4187 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_10166A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 107.6 | 6.8e-34 | 41 | 95 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
kprl+WtpeLHerFveav+qLGGsekAtPkti++lm+++gLtl+h+kSHLQkYRl
Oropetium_20150105_10166A 41 KPRLKWTPELHERFVEAVHQLGGSEKATPKTIMRLMGIPGLTLYHLKSHLQKYRL 95
79****************************************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 336 aa
Download sequence Send
to blast |
MYHQQQLQSH KQHLASSLPP EKQFLLQGGG DSGLILSTDA KPRLKWTPEL HERFVEAVHQ 60
LGGSEKATPK TIMRLMGIPG LTLYHLKSHL QKYRLSKNLQ AQARAAHAKS VSGCRTATDK 120
VCEGSPASHF ALEPQINRSL HLSEALQMQI EVQRRLHEQL EVQRHVQLRI EAQGKYLQSV 180
LEKAQEALAK QGVDVDGLFK ARHPPELRLR RQEQHPGFGD GSVDSCLTAC EGFHQKKEHD 240
DMLLSIGLCT PHQLGXXXXX XXXXXCCEEY VFLQEPTRVL ASPSPADEQC GEFRRDDDGF 300
IGSAAAELDL SINSAGTCRP RSGCDKIDLN GSNWK*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 2e-21 | 41 | 97 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 2e-21 | 41 | 97 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 2e-21 | 41 | 97 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 2e-21 | 41 | 97 | 1 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that may activate the transcription of specific genes involved in nitrogen uptake or assimilation (PubMed:15592750). Acts redundantly with MYR1 as a repressor of flowering and organ elongation under decreased light intensity (PubMed:21255164). Represses gibberellic acid (GA)-dependent responses and affects levels of bioactive GA (PubMed:21255164). {ECO:0000269|PubMed:21255164, ECO:0000305|PubMed:15592750}. |
| UniProt | Transcription factor that may act on the GAL1 promoter (PubMed:12008900). Acts redundantly with MYR2 as a repressor of flowering and organ elongation under decreased light intensity (PubMed:21255164). Represses gibberellic acid (GA)-dependent responses and affects levels of bioactive GA (PubMed:21255164). {ECO:0000269|PubMed:21255164, ECO:0000305|PubMed:12008900}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by nitrogen deficiency. {ECO:0000269|PubMed:15592750}. |
