 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_09929A |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
|
| Family |
NAC |
| Protein Properties |
Length: 224aa MW: 25704.8 Da PI: 5.0664 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_09929A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 26.1 | 2.4e-08 | 31 | 73 | 6 | 48 |
NAM 6 rFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp 48
F+Pt++elv ++L+++++g + +++ ++ e+d +++ PwdL
Oropetium_20150105_09929A 31 GFDPTEDELVLHFLRPQLRGFPPRVSGAVVEADPCSAAPWDLL 73
6************************999*************95 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 224 aa
Download sequence Send
to blast |
MADEMNLRAX XXXXXXXXXX XXEEEEAEEV GFDPTEDELV LHFLRPQLRG FPPRVSGAVV 60
EADPCSAAPW DLLAXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 120
XXXWCRVKYC FYVRVGEEHG KQQRSTGWVM EEYEITDPTC YRRXXXXXXX XYWVLCRVRK 180
SSRTAAVTLS SPSWSAGSSS ALRKRMLAAG CPVGVEAERF LLF*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK377068 | 1e-32 | AK377068.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv3147G02. |
