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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_08495A |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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| Family |
C2H2 |
| Protein Properties |
Length: 133aa MW: 14468.3 Da PI: 8.3303 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_08495A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 11.9 | 0.00069 | 94 | 114 | 1 | 21 |
EEETTTTEEESSHHHHHHHHH CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHir 21
+kC+ C+k+F + L H++
Oropetium_20150105_08495A 94 HKCKLCSKVFASGKALGGHMK 114
79**********999999997 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 133 aa
Download sequence Send
to blast |
YGLRDRRHRT WLLCDSSDDQ EIEDLTLVPK TECQLCFKRD SNSGYQVQES KVGLDCSSHG 60
QFGDDKPTKP ENCSSDGRMK FSSLSGVLKA TAVHKCKLCS KVFASGKALG GHMKASQGSC 120
TWKSSSIPQL CS*
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