 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_07278A |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
|
| Family |
G2-like |
| Protein Properties |
Length: 352aa MW: 37530.3 Da PI: 6.0433 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_07278A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 39.6 | 1.1e-12 | 136 | 187 | 1 | 40 |
G2-like 1 kprlrWtpeLHerFveaveqLGGse............kAtPktilelmkvkg 40
k+r++W+peLH+rFv+a++ LGG++ +AtPk+i+elmk
Oropetium_20150105_07278A 136 KARRCWSPELHRRFVNALQILGGAQdklnsfcflankVATPKQIRELMKKYR 187
68*********************743333333333337**********9765 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 352 aa
Download sequence Send
to blast |
MSSSSPSDLT LDYKPNGGAY ASSTTTPKET TEHPLPIDTT LGAALDGQRN GGAFLPFAKD 60
NKQDAVAAAL PELGLAPAEK DXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXA 120
LEGQQASPAQ PQTHRKARRC WSPELHRRFV NALQILGGAQ DKLNSFCFLA NKVATPKQIR 180
ELMKKYRLHT RRPPAPPTPA TAAPQLVVLG GIWVPPEYAS QAAAPAIYGA HPATQPHYTA 240
AVAAAHQEYY PSPAAVHHLQ HHPAAAMVHR AAAVPPPHAY KAVMAGSPPE SSEGRGSAGV 300
GSVGGSGGVG RDRSESIEEE GEGEEREEED DDEDDMMTAG KADGDESAVK Y*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT086572 | 4e-58 | BT086572.2 Zea mays full-length cDNA clone ZM_BFc0184N23 mRNA, complete cds. |
