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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Oropetium_20150105_07025A |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
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Family |
ERF |
Protein Properties |
Length: 331aa MW: 35655.2 Da PI: 4.6398 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Oropetium_20150105_07025A | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 43.4 | 8.2e-14 | 114 | 156 | 3 | 49 |
AP2 3 ykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaa 49
y+GVr +k +g+W+AeIr + + kr +lg+f+ta A a+ a
Oropetium_20150105_07025A 114 YRGVRLRK-WGKWAAEIRNpF-----TgKRQWLGTFDTAAAASTAYLTA 156
9*****99.**********55.....45**********99999999776 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 331 aa
Download sequence Send
to blast |
MAPLNHQQML IKKALAKKSK TKRISGFGIK PSSTGLLKAK PQLPPATVQP RRRVRVLFED 60 PDATDSDSDD EEPSASVKSK RFSFELFLGK ATPKPVMPAA AVAASTSGGE PESYRGVRLR 120 KWGKWAAEIR NPFTGKRQWL GTFDTAAAAS TAYLTASRSF AEEKRRRRGQ PVAATSSATP 180 SPCTTPTASS SSSTSAAPFA HPSPSSVLET TKPAPKQLSP EPAPTPIPAA TTEPAQLPDD 240 PEFYQDLLRG LQLPDIDPMD FRAGLDALDV SEVPFCLDDE QEDLLLGDLG DEELELDLDL 300 EDMGDIFLDM SGCDLGRGMD DFLQTVDFCV *
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