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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_06295A |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
|
| Family |
NAC |
| Protein Properties |
Length: 146aa MW: 16328.9 Da PI: 4.182 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_06295A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 40.1 | 1.1e-12 | 2 | 65 | 66 | 128 |
NAM 66 kkyatgkrknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
++y+ g+r+ r + g+Wk+ k+++++ ++++++g+ ++L+f g++p+g +t+W m+ey++
Oropetium_20150105_06295A 2 RRYPFGSRPARgVKGVGFWKSNTKETDIVLNDNTVIGTVTSLTFELGHQPHGIQTSWKMKEYSV 65
578899*****88889**************9*******************************86 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 146 aa
Download sequence Send
to blast |
MRRYPFGSRP ARGVKGVGFW KSNTKETDIV LNDNTVIGTV TSLTFELGHQ PHGIQTSWKM 60
KEYSVPEKRY SCNGLNMRDT DVPEGYEDGM TVEQGDEQAN TADEGVGEVE VDSNTQIMPV 120
DWSLSNFEED LSVDDYIVSD PTERR*
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