 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_06008A |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
|
| Family |
G2-like |
| Protein Properties |
Length: 470aa MW: 47799.2 Da PI: 7.5601 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_06008A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101.7 | 4.7e-32 | 277 | 330 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
pr+rWt++LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
Oropetium_20150105_06008A 277 PRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 330
9****************************************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009887 | Biological Process | organ morphogenesis |
| GO:0009944 | Biological Process | polarity specification of adaxial/abaxial axis |
| GO:0009956 | Biological Process | radial pattern formation |
| GO:0010051 | Biological Process | xylem and phloem pattern formation |
| GO:0010158 | Biological Process | abaxial cell fate specification |
| GO:0010229 | Biological Process | inflorescence development |
| GO:0048481 | Biological Process | plant ovule development |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 470 aa
Download sequence Send
to blast |
MEASSAASPD LSLHISLPNG AAGSGPSAGR SAAVGGAGGG RGGGGGGAGG GDPWRRLNGS 60
TASTELSLSP PAEPDADALP WRHRPSSATA SSSAATTSAG GAPLMSMPML LPLDAGGGGG 120
CASAAPPIRG IPIYNGPGGF PFLPPVAGGD GHHHQQHHQK VGFYGSYHHP TTTWPSSLAS 180
TSPSPAGAPP PASFDPASAF LSPAAHHHHR MLSAASGRLN GMLTDTLRGY GGGGGVGGLA 240
GIGGHHHHHH HLHGAPPFGL GSRFMPKLPA KRSMRAPRMR WTSTLHARFV HAVELLGGHE 300
RATPKSVLEL MDVKDLTLAH VKSHLQMYRT VKSTDKPAAS SGPTDGGSGD DEFSGAGQAX 360
XXXXXXXXXP FGEHRSTSEG AASSAGGGDM DQSSVGNTGT RWSNSSRDPW VSLNSCTMDA 420
HRLVVGLSSP IENAEPCRSS SSQVSNHELS SPSLEFTLGR PDWQGADHD*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 3e-16 | 278 | 332 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 3e-16 | 278 | 332 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 3e-16 | 278 | 332 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 3e-16 | 278 | 332 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor that regulates abaxial identity during leaf development. {ECO:0000269|PubMed:18594992}. |
