 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_04335A |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
|
| Family |
GeBP |
| Protein Properties |
Length: 322aa MW: 34503 Da PI: 9.6808 |
| Description |
GeBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_04335A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | DUF573 | 43.6 | 8.1e-14 | 135 | 201 | 4 | 69 |
DUF573 4 qrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkv 69
q+ ws+ De +lL + +df+++tg p d+ +f++ + +sis ++ + + K++rLK Kf++
Oropetium_20150105_04335A 135 QKHWSDADEFTLLNAALDFRKRTGRVPRLpDMAEFFDSIAGSISPEIDQWMVYYKLKRLKSKFQHTD 201
789**********************77766*********************************9875 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 322 aa
Download sequence Send
to blast |
MSSVSAMDAD AEPAPPSSPR SRKRPSLTGD DGQSSPNPSP GGSPAAGRSA LKRKLRTSAE 60
SAALALATVA AHASAAGVVD ADADRAAAKR RGPAGVRVDD EGHGAIQMLG AAAARVDRAH 120
AAAEGPVTRG RGAGQKHWSD ADEFTLLNAA LDFRKRTGRV PRLPDMAEFF DSIAGSISPE 180
IDQWMVYYKL KRLKSKFQHT DGPSDRRLRN LCTDLWGAFP SHEDIWDGET DAEERRAAPD 240
AAAMMPVLAE VLGEYWKTNA GVMKGLPLEK GLSRLGKKQG RLLEIKWRQQ LDEEMQTQMR 300
RHELAKEVLS LLSGAIKGLG P*
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT4G00250.1 | 4e-08 | DNA-binding storekeeper protein-related transcriptional regulator |
