 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Oropetium_20150105_04190A |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Cynodonteae; Tripogoninae; Oropetium
|
| Family |
Nin-like |
| Protein Properties |
Length: 187aa MW: 21270.5 Da PI: 9.3392 |
| Description |
Nin-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Oropetium_20150105_04190A | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | RWP-RK | 82.8 | 3.3e-26 | 62 | 111 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52
k ++e++s++Fs+pik+AA+eL+v++TvLK++CR + I+RWPhRk+ksl
Oropetium_20150105_04190A 62 KLFTFEQVSRHFSMPIKQAARELNVGPTVLKKRCRDLDIPRWPHRKVKSL 111
5679********************************************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 187 aa
Download sequence Send
to blast |
MISGELDGLS EIDGDFSSVW PQMEDAYRKS MEGDKEVNME CGGVESGKKM QGLLRGSGAD 60
KKLFTFEQVS RHFSMPIKQA ARELNVGPTV LKKRCRDLDI PRWPHRKVKS LQTLINNVQE 120
LGKEDSHRTR AVVEMLQHTK RMMEKKPAAM LDENTKALRQ ACFKEKFKRR RLMAHAVECG 180
WDDSAC*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Putative transcription factor. {ECO:0000250}. |
