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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORUFI12G20110.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 197aa MW: 20878.2 Da PI: 4.6196 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORUFI12G20110.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 43.8 | 6.5e-14 | 25 | 69 | 2 | 51 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaark 51
+++GVr+++ grW+AeIrd + + ++g+f+ta eAa a++a ++
ORUFI12G20110.1 25 RFRGVRQRP-YGRWAAEIRD------TvvQGTRIGTFDTAVEAALAYDATAR 69
69*******.7*********......44599******************987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 197 aa
Download sequence Send
to blast |
MNKDDEVVTK KGNKAGRRRP ASRHRFRGVR QRPYGRWAAE IRDTVVQGTR IGTFDTAVEA 60 ALAYDATARW LYGSKAVTNF PTTTGDGDDG LPVAEPAVVV VAAPAFAGEE MDKQVAPAAA 120 TAAETVAADP GAGELGPVVL CHELEATNGW QYEAYGYGYS MGLELLENYA YAGDVQPLGL 180 GGSTSNAAAA NDCLWMF
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AL837528 | 0.0 | AL837528.5 Oryza sativa chromosome 12, . BAC OSJNBb0062H20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence. |
GenBank | AP014968 | 0.0 | AP014968.1 Oryza sativa Japonica Group DNA, chromosome 12, cultivar: Nipponbare, complete sequence. |
GenBank | CP012620 | 0.0 | CP012620.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 12 sequence. |