![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORUFI12G18110.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
Dof |
Protein Properties |
Length: 260aa MW: 26381 Da PI: 6.8835 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORUFI12G18110.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Oru&pid=ORUFI12G18110.1) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 38.7 | 2.1e-12 | 98 | 119 | 5 | 26 |
zf-Dof 5 alkcprCdstntkfCyynnysl 26
+l+cprCdstntkfCy+nnysl
ORUFI12G18110.1 98 TLRCPRCDSTNTKFCYFNNYSL 119
679*****************97 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 260 aa
Download sequence Send
to blast |
MVFSSLPIFL DPPNWTQMQQ QSLQCLIGGG GGSDHHHLMP PPSGLAPLPS AAGAADTAAS 60 APAGGSSAAA ATQQQRPAVV SMSERARLAR VPLPEPGTLR CPRCDSTNTK FCYFNNYSLR 120 ATSARLXGLP SSAAAAAALE ASLEGYHHHG HGHGHQLPFL QPPPFLQQGL HGYHFADGDV 180 IAGGGALADG GFPRGVASGL LAQLASVKME EHGTNNGGGG GVGGFVGAHE QYWHGGNGGG 240 GGWPAEFLSG FSSSSSGNVL
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AL731784 | 0.0 | AL731784.3 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence. |
GenBank | AP014968 | 0.0 | AP014968.1 Oryza sativa Japonica Group DNA, chromosome 12, cultivar: Nipponbare, complete sequence. |
GenBank | CP012620 | 0.0 | CP012620.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 12 sequence. |