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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | ORUFI11G02320.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family | NAC | ||||||||
Protein Properties | Length: 769aa MW: 83159.5 Da PI: 6.0912 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 39 | 2.4e-12 | 605 | 702 | 29 | 127 |
NAM 29 eleevikevdiykvePwdLp.k.....kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkg 116 ++e++i ++d+y +eP+dL k + e+ fF++ ++++ +++rk+r++ +g+W + + k v++k g +vg + + f ++g ORUFI11G02320.1 605 DTEKFICRADVYGSEPSDLAgKfapvpR--CEKGGRLFFTSCKRHKGSSTRKERTAGDGTWVRQNS-KGVKNKAGVKVGETQNFRFK----KDG 691 44467999***********843454222..2445779999999999****************8866.889999*************7....789 PP NAM 117 ektdWvmheyr 127 + tdW+m+e + ORUFI11G02320.1 692 SYTDWLMEEHH 702 99*******98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF53474 | 3.13E-36 | 10 | 319 | IPR029058 | Alpha/Beta hydrolase fold |
Gene3D | G3DSA:3.40.50.1820 | 2.1E-50 | 25 | 318 | IPR029058 | Alpha/Beta hydrolase fold |
Pfam | PF07859 | 2.5E-36 | 92 | 315 | IPR013094 | Alpha/beta hydrolase fold-3 |
Gene3D | G3DSA:3.40.50.1820 | 4.1E-44 | 338 | 606 | IPR029058 | Alpha/Beta hydrolase fold |
SuperFamily | SSF53474 | 6.63E-30 | 363 | 606 | IPR029058 | Alpha/Beta hydrolase fold |
Pfam | PF07859 | 9.4E-29 | 438 | 611 | IPR013094 | Alpha/beta hydrolase fold-3 |
PROSITE profile | PS51005 | 14.051 | 574 | 723 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 6.02E-13 | 608 | 723 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.3E-4 | 629 | 702 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0016787 | Molecular Function | hydrolase activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 769 aa Download sequence Send to blast |
MPSTTTAPET DPSKTVVEEV TGWLRLYSDG TVERLTPPDA EPFTVIVPPY TEPRNGVTVH 60 DVTTARGVDV RLYLPAEPPA AAPRPRRRRP LLLHLHGGGF CLSRPSWALY HNFYAPLAAK 120 LDVAGIVSVF LPLAPEYRLP AAIDAGHAAL LWLRDVACGD EGNLDPAVER LRDEADFSRV 180 FLIGDSSGGN LDDGAGADLH AVRLAGGVLL NPGFAREEKS RSELENPPSL FLTEDMVDKL 240 LALGVPLGMN KDSPYTSPSL VAEAVARLHM PPMLLVVAEK DLLHDPQVEY GEAMARVGKT 300 VETVVSRGAV AHVFYLNFFA VDIACSFHIF TATYSIIWPA AAMATLPQMA ATKERQEAAN 360 PTTTTRTLVE SVTNWIRVYS DGSVDRLGPP EAAAFMVLVP PYDDPRDGVT VHDVATDHGV 420 DVRLYLTTTA PARRRPVLVH FHGGGFCLSH AAWSLYHRFY ARLTVDLDVA GIVSVVLPLA 480 PEHRLPAAID AGHAALLWLR DVASGGSDTI AHPAVERLCG AADFSRVFLI GDSAGGVLVH 540 NVAARAGEAG AEALDPIRLA GGVQLHPGFI LPEKSPSELE NPPTPFMTQE TVDKFVVLAL 600 PPTKDTEKFI CRADVYGSEP SDLAGKFAPV PRCEKGGRLF FTSCKRHKGS STRKERTAGD 660 GTWVRQNSKG VKNKAGVKVG ETQNFRFKKD GSYTDWLMEE HHCCRQQAVA GDEEPVICRM 720 YVSPRAPPDS AARQESAAFV QQQPAPQVSE PPCDKKKRDD VAEEAPAAA |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
2o7r_A | 6e-22 | 70 | 612 | 53 | 296 | CXE carboxylesterase |
2o7v_A | 6e-22 | 70 | 612 | 53 | 296 | CXE carboxylesterase |
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Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC123527 | 0.0 | AC123527.3 Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence. | |||
GenBank | AP014967 | 0.0 | AP014967.1 Oryza sativa Japonica Group DNA, chromosome 11, cultivar: Nipponbare, complete sequence. | |||
GenBank | FQ378034 | 0.0 | FQ378034.1 Oryza glaberrima chromosome 11. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015615813.1 | 0.0 | probable carboxylesterase 17 | ||||
TrEMBL | A0A0E0R3X7 | 0.0 | A0A0E0R3X7_ORYRU; Uncharacterized protein | ||||
STRING | ORUFI11G02320.1 | 0.0 | (Oryza rufipogon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1234 | 7 | 8 |