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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORUFI08G20510.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
HD-ZIP |
Protein Properties |
Length: 282aa MW: 30554.7 Da PI: 4.4715 |
Description |
HD-ZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORUFI08G20510.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Homeobox | 56.7 | 4.2e-18 | 43 | 95 | 3 | 55 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRake 55
k+++++ eq+++Le+ Fe ++++ e++++LA+ lgL+ rqV vWFqNrRa++
ORUFI08G20510.1 43 KKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRARQ 95
456899*********************************************96 PP
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2 | Homeobox | 20.7 | 6.9e-07 | 94 | 108 | 42 | 56 |
HHHHHHHHHHHHHHH CS
Homeobox 42 rqVkvWFqNrRakek 56
rqV vWFqNrRa++k
ORUFI08G20510.1 94 RQVAVWFQNRRARWK 108
8*************9 PP
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3 | HD-ZIP_I/II | 86.5 | 3.4e-28 | 42 | 94 | 1 | 53 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRAR 53
ekkrrls eqv++LE+sFe+e+kLeperK++lar+LglqprqvavWFqnrRAR
ORUFI08G20510.1 42 EKKRRLSVEQVRALERSFETENKLEPERKARLARDLGLQPRQVAVWFQNRRAR 94
69**************************************************9 PP
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4 | HD-ZIP_I/II | 72 | 1.2e-23 | 93 | 146 | 40 | 93 |
HD-ZIP_I/II 40 prqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
+rqvavWFqnrRAR+ktkqlE+dy+aL+++ydal++++++L++++++L +e+ke
ORUFI08G20510.1 93 ARQVAVWFQNRRARWKTKQLERDYAALRQSYDALRADHDALRRDKDALLAEIKE 146
59***********************************************99987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009637 | Biological Process | response to blue light |
GO:0030308 | Biological Process | negative regulation of cell growth |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0048510 | Biological Process | regulation of timing of transition from vegetative to reproductive phase |
GO:0048573 | Biological Process | photoperiodism, flowering |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 282 aa
Download sequence Send
to blast |
MRSPAALLPV VADGGGGVGV EEEMDVDEDM AMCGGRGGGG GEKKRRLSVE QVRALERSFE 60 TENKLEPERK ARLARDLGLQ PRQVAVWFQN RRARQVAVWF QNRRARWKTK QLERDYAALR 120 QSYDALRADH DALRRDKDAL LAEIKELKGK LGDEDAAASF SSVKEEEEDP AASDADPPAT 180 GAPQGSSESD SSAVLNDAEI PPHKPAPAAA ADAAASEETE AVVTGAALLH HAEVFFHGQL 240 LKVDDDEAAF LGDDGAACGG FFADEHLPSL PWWAEPTEQW TT
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 33 | 40 | GGRGGGGG |
2 | 67 | 73 | ERKARLA |
3 | 102 | 110 | RRARWKTKQ |
Functional Description ? help
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Source |
Description |
UniProt | Probable transcription factor. {ECO:0000250}. |
UniProt | Probable transcription factor. {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Down-regulated in leaves by drought stress. {ECO:0000269|PubMed:17999151}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK068244 | 0.0 | AK068244.1 Oryza sativa Japonica Group cDNA clone:J013140I04, full insert sequence. |
GenBank | AK106818 | 0.0 | AK106818.1 Oryza sativa Japonica Group cDNA clone:002-116-D05, full insert sequence. |
GenBank | CT829446 | 0.0 | CT829446.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSA031N19, full insert sequence. |