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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORUFI07G24680.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
GeBP |
Protein Properties |
Length: 324aa MW: 35545.4 Da PI: 9.4426 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORUFI07G24680.1 | genome | OGE | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 107.8 | 7.8e-34 | 27 | 126 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifel 91
lfqrlw+eeDeiv+L+G+ +f+a +g+ +++ d+d fye +++++++ +sksqlveK+rrLK+K++++v++ + sg+ +sf+++h+q ife+
ORUFI07G24680.1 27 LFQRLWTEEDEIVILRGFAEFTAARGTafASHQyDTDPFYEDMRGRLQLGFSKSQLVEKLRRLKRKYRNCVSRlRGSGSAFSFRSPHEQAIFEI 120
79************************99877778***************************************8889***************** PP
DUF573 92 skkiWg 97
++ iW+
ORUFI07G24680.1 121 ARNIWR 126
*****8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 324 aa
Download sequence Send
to blast |
MATPAAAGGG SVGGVGSSSG GGERRPLFQR LWTEEDEIVI LRGFAEFTAA RGTAFASHQY 60 DTDPFYEDMR GRLQLGFSKS QLVEKLRRLK RKYRNCVSRL RGSGSAFSFR SPHEQAIFEI 120 ARNIWRPTNK HGRDGDSDDE DATQVTPAPV PVNTSPNGEV KSPTSGRQRR RRRGGDFAAT 180 APAAAPATTN MVQPIQPVQV PVSVPVKMDD TLPALSQTTM PITVTMEGSE PLRLPVMPPQ 240 PAVLDADKSC LTPLFKEMVR AVINIESNPF GAQLSEPPHG LPMEGEKWRK QRILELEVYL 300 KRIELLQDQV KAMLEELKSS APGT
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP003749 | 0.0 | AP003749.3 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1136_D11. |
GenBank | AP014963 | 0.0 | AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G04930.2 | 4e-35 | DNA-binding storekeeper protein-related transcriptional regulator |