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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
ORUFI03G37500.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
NAC |
| Protein Properties |
Length: 366aa MW: 40921 Da PI: 6.7906 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ORUFI03G37500.1 | genome | OGE | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 163.6 | 7.2e-51 | 39 | 170 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94
pGfrFhPtdeelv++yL++kv++k+l++ e+ike+diyk++PwdLp +++ ++ekewyfF+ r +ky+++ r+nr+t sg+Wkatg d++++s
ORUFI03G37500.1 39 LPGFRFHPTDEELVTFYLRRKVARKSLSI-EIIKEMDIYKHDPWDLPnASTVGGEKEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDRPIYS 131
69***************************.89***************556666899************************************** PP
NAM 95 k.....kgelvglkktLvfykgrapkgektdWvmheyrl 128
+ +ge +glkk+Lv+y+g+a kg+ktdW+mhe+rl
ORUFI03G37500.1 132 AavnsnSGESIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 170
9888888888***************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0005992 | Biological Process | trehalose biosynthetic process |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0006561 | Biological Process | proline biosynthetic process |
| GO:0009718 | Biological Process | anthocyanin-containing compound biosynthetic process |
| GO:0010120 | Biological Process | camalexin biosynthetic process |
| GO:0042538 | Biological Process | hyperosmotic salinity response |
| GO:1900056 | Biological Process | negative regulation of leaf senescence |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 366 aa
Download sequence Send
to blast |
MVTSKEFARD QAAMDQKIKS DVGEVVLAGD EEEDGDVVLP GFRFHPTDEE LVTFYLRRKV 60
ARKSLSIEII KEMDIYKHDP WDLPNASTVG GEKEWYFFCL RGRKYRNSIR PNRVTGSGFW 120
KATGIDRPIY SAAVNSNSGE SIGLKKSLVY YRGSAGKGTK TDWMMHEFRL PPAIAAADAS 180
PCMQEAEVWT ICRIFKRSIT YRKQQQQQAW RPPAPAPATV TVKAPPPGDS SSNTGSFESD 240
GGGDEFMNCG LTPAISQQQQ HGGRHQMMST MSCNGGYFFN DGIHHSHSYH KLHSQWGSLQ 300
MAPPEPKPEP EQKPLSSPAM TIAFHQNDHG FPAAAADFYK DGYLEEIARM MEVADPSPTG 360
FYDCRY
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 9e-49 | 40 | 203 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 9e-49 | 40 | 203 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 9e-49 | 40 | 203 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 9e-49 | 40 | 203 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-48 | 40 | 203 | 22 | 174 | NAC domain-containing protein 19 |
| 3swm_B | 1e-48 | 40 | 203 | 22 | 174 | NAC domain-containing protein 19 |
| 3swm_C | 1e-48 | 40 | 203 | 22 | 174 | NAC domain-containing protein 19 |
| 3swm_D | 1e-48 | 40 | 203 | 22 | 174 | NAC domain-containing protein 19 |
| 3swp_A | 1e-48 | 40 | 203 | 22 | 174 | NAC domain-containing protein 19 |
| 3swp_B | 1e-48 | 40 | 203 | 22 | 174 | NAC domain-containing protein 19 |
| 3swp_C | 1e-48 | 40 | 203 | 22 | 174 | NAC domain-containing protein 19 |
| 3swp_D | 1e-48 | 40 | 203 | 22 | 174 | NAC domain-containing protein 19 |
| 4dul_A | 9e-49 | 40 | 203 | 19 | 171 | NAC domain-containing protein 19 |
| 4dul_B | 9e-49 | 40 | 203 | 19 | 171 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AK073539 | 0.0 | AK073539.1 Oryza sativa Japonica Group cDNA clone:J033041C24, full insert sequence. |
| Publications
? help Back to Top |
- Shahnejat-Bushehri S,Nobmann B,Devi Allu A,Balazadeh S
JUB1 suppresses Pseudomonas syringae-induced defense responses through accumulation of DELLA proteins.
Plant Signal Behav, 2016. 11(6): p. e1181245
[PMID:27159137] - Shahnejat-Bushehri S,Tarkowska D,Sakuraba Y,Balazadeh S
Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling.
Nat Plants, 2016. 2: p. 16013
[PMID:27249348] - Shahnejat-Bushehri S, et al.
Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato.
Front Plant Sci, 2017. 8: p. 214
[PMID:28326087] - Sakuraba Y,Bülbül S,Piao W,Choi G,Paek NC
Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways.
Plant J., 2017. 92(6): p. 1106-1120
[PMID:29032592] - Ebrahimian-Motlagh S, et al.
JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
Front Plant Sci, 2017. 8: p. 2118
[PMID:29326734]
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