PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORUFI03G15900.1
Organism
Oryza rufipogon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family bZIP
Protein Properties Length: 305aa    MW: 33881.3 Da    PI: 7.1655
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORUFI03G15900.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.31e-106393434
                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
           bZIP_1  4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34
                      k+ rr+++NReAAr+sR+RKka++++Le  
  ORUFI03G15900.1 63 QKVLRRLAQNREAARKSRLRKKAYVQQLESS 93
                     5899************************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.2E-760123IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.87562106IPR004827Basic-leucine zipper domain
PfamPF001701.1E-76494IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.94E-765107No hitNo description
Gene3DG3DSA:1.20.5.1703.3E-866106No hitNo description
PROSITE patternPS0003606782IPR004827Basic-leucine zipper domain
PfamPF141443.9E-33146221IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    Send to blast
MADASSRTDT STVLDTDDKN QMAHHFDINF VKNLIVKVDR QSGAIVPSNS SDRSDRSDKP  60
MDQKVLRRLA QNREAARKSR LRKKAYVQQL ESSKLKLASL EQEINKARQQ GIYISSSGDQ  120
THAMSGNGAM TFDLEYARWL EEQNKQINEL RTAVNAHASD SDLRLIVDGI MAHYDEIFRL  180
KGVAAKADVF HILSGMWKTP AERCFLWLGG FRSSELLKLL VNQLEPLTEQ QLLGLSNLQQ  240
SSQQAEDALS QGMEALQQSL ADTLAGSLGP SGSSGNVANY MGQMAMAMGK LGTLENFLRQ  300
IVQLY
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2422570.0AK242257.1 Oryza sativa Japonica Group cDNA, clone: J075183E21, full insert sequence.
GenBankAY6204140.0AY620414.1 Oryza sativa (japonica cultivar-group) clone OSJNBa0005J15 bZIP transcription factor mRNA, complete cds.
GenBankHM9911730.0HM991173.1 Oryza sativa Japonica Group cultivar Dongjin putative TGA2-like protein 1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015632465.10.0transcription factor TGA2.2
RefseqXP_015632466.10.0transcription factor TGA2.2
RefseqXP_015632467.10.0transcription factor TGA2.2
SwissprotQ6IVC30.0TGA22_ORYSJ; Transcription factor TGA2.2
TrEMBLA0A0E0NUA20.0A0A0E0NUA2_ORYRU; Uncharacterized protein
STRINGORUFI03G15900.10.0(Oryza rufipogon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.41e-118TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Chern M,Fitzgerald HA,Canlas PE,Navarre DA,Ronald PC
    Overexpression of a rice NPR1 homolog leads to constitutive activation of defense response and hypersensitivity to light.
    Mol. Plant Microbe Interact., 2005. 18(6): p. 511-20
    [PMID:15986920]
  2. Chern M, et al.
    Interaction specificity and coexpression of rice NPR1 homologs 1 and 3 (NH1 and NH3), TGA transcription factors and Negative Regulator of Resistance (NRR) proteins.
    BMC Genomics, 2014. 15: p. 461
    [PMID:24919709]