 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
ORGLA12G0153000.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
WRKY |
| Protein Properties |
Length: 361aa MW: 38249.4 Da PI: 10.2433 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ORGLA12G0153000.1 | genome | AGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 87.5 | 1.2e-27 | 293 | 346 | 3 | 55 |
-SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES- CS
WRKY 3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYege 55
D+y+WrKYGqK++kgs++pr+YY+C+s gCp++k+ver+ +dp ++++tYe++
ORGLA12G0153000.1 293 DEYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERCVDDPAMLIVTYEEN 346
9*************************988**********************987 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0005516 | Molecular Function | calmodulin binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 361 aa
Download sequence Send
to blast |
MEEEVEAANR AAVESCHRVL ALLSQQQDPA LLRSIAAETG EACAKFRKVV SLLGNGGGGG 60
GGGHARGRMA GRSRPSAVLR EKGFLESSSG GGQLGMMMSG AATPSTSSAA HLRNRIGGGG 120
GVPPDSLRGL DLVSSSSKGG AHQFDPPKLV QPLSVQFQFG ATAHRYPFQQ HQHQQKLQAE 180
MFKRSNSGIS LKFDSPSATG TMSSAFMSSL SMDGSVASLE GKPPFHLISG PVASDPVNAH 240
HAPKRRCTGR GEDGSGKCAT TGRCHCSKRR KLRIKRSIKV PAISNKIADI PPDEYSWRKY 300
GQKPIKGSPH PRGYYKCSSV RGCPARKHVE RCVDDPAMLI VTYEENAEAP SFCSGTVGPV 360
M
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK070648 | 0.0 | AK070648.1 Oryza sativa Japonica Group cDNA clone:J023062B16, full insert sequence. |
