 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
ORGLA12G0149800.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
Dof |
| Protein Properties |
Length: 254aa MW: 25607.3 Da PI: 9.6174 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ORGLA12G0149800.1 | genome | AGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 110.8 | 6.3e-35 | 52 | 106 | 6 | 60 |
zf-Dof 6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
+cprC s++tkfCyynny+++qPr+fC+aCrryWt GG+lrnvP+Gg++rk+ +
ORGLA12G0149800.1 52 EQCPRCASRDTKFCYYNNYNTAQPRHFCRACRRYWTLGGSLRNVPIGGSTRKRPR 106
68**************************************************876 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 254 aa
Download sequence Send
to blast |
MEAPLHQSPV PLLPPPPPPP RVVGVQQQQQ QQEAVVPPPP AMAAAAGGGG REQCPRCASR 60
DTKFCYYNNY NTAQPRHFCR ACRRYWTLGG SLRNVPIGGS TRKRPRPSRP ARAAIAAAAA 120
ASASGSQIAA QQQQAPPVVM SQHEAAAAAA AASGGGGGGG LLVSLLGAAP VLEGRLGGGI 180
GVDLLGGEQL GFGAMAMPPA PLLWPARVLE GGDAWKSAAA AAGVSYSPFP ALWQELAAAA 240
PVELAGGGGA PQLM
|
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AL954829 | 0.0 | AL954829.6 Oryza sativa chromosome 12, . BAC OSJNBa0044E20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence. |
| GenBank | AP014968 | 0.0 | AP014968.1 Oryza sativa Japonica Group DNA, chromosome 12, cultivar: Nipponbare, complete sequence. |
