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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORGLA12G0092600.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
NAC |
Protein Properties |
Length: 420aa MW: 45260.3 Da PI: 7.5228 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORGLA12G0092600.1 | genome | AGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 64.1 | 4.3e-20 | 11 | 135 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykv.ePwdLp.k...kvkaeekewyfFskrdkkyatgkrknratksgyWkatg 87
GfrF+P+ e +v++yL v+g++ ++e +i+++d+y + eP+dL k +++++ + +fF+ ++ + + +r++ g+W ++
ORGLA12G0092600.1 11 ELGFRFNPSPEHVVTYYLPCLVAGQQpKDTEGCIHSADVYGAdEPRDLAgKyapVARSSNGHRFFFTGCRRMKG---KFSRSAGGGTWVSQS 99
57**********************994445556*******9869****84355433445558899999999764...7999999*****886 PP
NAM 88 kdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
+ k++++++g ++g k + f ++g++tdW+m+ey+l
ORGLA12G0092600.1 100 S-KDLKNREGIKIGEVKNFRFK----KDGKNTDWLMEEYHL 135
6.888888*************7....78899********98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 420 aa
Download sequence Send
to blast |
MEKGKLDFLL ELGFRFNPSP EHVVTYYLPC LVAGQQPKDT EGCIHSADVY GADEPRDLAG 60 KYAPVARSSN GHRFFFTGCR RMKGKFSRSA GGGTWVSQSS KDLKNREGIK IGEVKNFRFK 120 KDGKNTDWLM EEYHLCGQES GDVVEPVVCR IYVSPRAAPD SVAHQESAVL QPQEPAPLPV 180 PAAPAPPRQV PVVTQQAPPP PPPLVPVITQ DAPPLKRPAP VAAPPCAKKM RGDVSAFPVV 240 RQSCVAAPRC APRVVAPPPR HPPIQTYPTD PFESAPLDPF EPPPAAASVT GGHHTPQPSV 300 PVPATPEQGL SLAASNSPEL DPANIGIDMD ELMRYLGNTP LDGVLPSQLF VLPTNDDEDV 360 ELAKVLHRNT RRRRKGRQWQ STAVCDSTSS SSATGILARH GATAASSTHP DLSKDPFEPN
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AL731785 | 0.0 | AL731785.2 Oryza sativa chromosome 12, . BAC OSJNBa0037L20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence. |
GenBank | AL731883 | 0.0 | AL731883.4 Oryza sativa chromosome 12, . BAC OSJNBa0024B03 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence. |
GenBank | AP014968 | 0.0 | AP014968.1 Oryza sativa Japonica Group DNA, chromosome 12, cultivar: Nipponbare, complete sequence. |