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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
ORGLA12G0021600.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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| Family |
GRAS |
| Protein Properties |
Length: 466aa MW: 50892.8 Da PI: 6.3949 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ORGLA12G0021600.1 | genome | AGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 291.1 | 3e-89 | 18 | 440 | 30 | 374 |
GRAS 30 laspdg.dpmqRlaayfteALaarlarsvselykal.ppsetseknsseelaalklfsevsPilkfshltaNqaIleavegeervHiiDfd. 118
a+ +g p +Rla ++ La+rl+r v+ + +al ps + ++ aa++ f+e+sP++k+++++ N+aI+eave+e+ vH++ ++
ORGLA12G0021600.1 18 AAAAAGdGPQKRLAEAMVDCLARRLLRPVQAITDALiDPSVYL--DRRSVRAARRGFFELSPFPKVAFVVGNRAIVEAVENESLVHVVGMSg 107
2455554699**********************99995444443..34555578899**********************************86 PP
GRAS 119 .isqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeL....rvkpgEalaV 204
+q+ QW+ Ll++L Rpegpp +R+T+v++ + e l +++e L++ Aeel+++f+f+ v+ +ledl++++L ++k+gEal+
ORGLA12G0021600.1 108 pFTQPCQWIQLLHELRRRPEGPPrVVRLTVVHD----DGELLAKMAEVLSDEAEELDMEFQFHG-VVGQLEDLDFSNLrdvlEIKSGEALVF 194
679****************9988789*******....***************************.7999****9999876668999****** PP
GRAS 205 nlvlqlhrll...................................................................desvsleserdevLk 229
++ lqlhrll +++++ + ++L+
ORGLA12G0021600.1 195 SCTLQLHRLLaadddamyssrsahlnqmasiaqlqqmavsscppstggggsvqykdddddpyrspatpltfvsppasTPHLQMPAALANFLS 286
***************************************************************************87555555557778*** PP
GRAS 230 lvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsl.eaklpres........eerikvErellgreivnvvacegaerrerhetl 312
+v+ lsPk+vvv+eq+adhn+ sF +rf+eal++y+a+fdsl +a ++++s +er+ vEr+++g+ei+ v+ ga+rrerh +l
ORGLA12G0021600.1 287 AVRALSPKIVVVAEQDADHNGVSFRKRFCEALHHYAAVFDSLdDAAAATTSaashlwspDERAQVERVVVGEEIKGVLLRDGAHRRERHDRL 378
******************************************766666666788899999******************************** PP
GRAS 313 ekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
++W +r+e+aGF+ vpls+ a + + ++r+++ + + e g+l+l+W++rpL+s+SaWr
ORGLA12G0021600.1 379 RQWAARMEMAGFTGVPLSYAAIRKGNDMVRRCGLRRCENRECGGCLLLCWSSRPLYSISAWR 440
*********************************887888899*******************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| Sequence ? help Back to Top |
| Protein Sequence Length: 466 aa
Download sequence Send
to blast |
MEKATRCLAR ATGLVAAAAA AAGDGPQKRL AEAMVDCLAR RLLRPVQAIT DALIDPSVYL 60
DRRSVRAARR GFFELSPFPK VAFVVGNRAI VEAVENESLV HVVGMSGPFT QPCQWIQLLH 120
ELRRRPEGPP RVVRLTVVHD DGELLAKMAE VLSDEAEELD MEFQFHGVVG QLEDLDFSNL 180
RDVLEIKSGE ALVFSCTLQL HRLLAADDDA MYSSRSAHLN QMASIAQLQQ MAVSSCPPST 240
GGGGSVQYKD DDDDPYRSPA TPLTFVSPPA STPHLQMPAA LANFLSAVRA LSPKIVVVAE 300
QDADHNGVSF RKRFCEALHH YAAVFDSLDD AAAATTSAAS HLWSPDERAQ VERVVVGEEI 360
KGVLLRDGAH RRERHDRLRQ WAARMEMAGF TGVPLSYAAI RKGNDMVRRC GLRRCENREC 420
GGCLLLCWSS RPLYSISAWR PAASGGAGSG SERSEYIHVG AEADDR
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