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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORGLA11G0040400.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
ERF |
Protein Properties |
Length: 321aa MW: 32657.9 Da PI: 5.417 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORGLA11G0040400.1 | genome | AGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64.4 | 2.4e-20 | 131 | 180 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae Aa+a++ a+++++g
ORGLA11G0040400.1 131 RYRGVRQRP-WGKWAAEIRDPV----KaARVWLGTFDTAEAAARAYDDAALRFRG 180
8********.**********64....55************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 321 aa
Download sequence Send
to blast |
MCGGGKVASP PGPRLPRLAG AGGEEEEEEA AAGMLSRHGQ AREMSVMVSA LARVVAGGGG 60 GEAEEWWPPA YGAAPLPPST SPASHEHAAA TAAGQYAPAT SSAMASPREQ ASSPSSGDAA 120 GGGGGGGGRK RYRGVRQRPW GKWAAEIRDP VKAARVWLGT FDTAEAAARA YDDAALRFRG 180 CRAKLNFPED AALLPPPPPP PAPAPTPTPP QSQGMVGVGE EYSEYARFLQ GAGEPPHFLE 240 QIMEDSPRPS TAAGASSSSS GQSSFPLFYS FAGHELGGNE ANLARPPESG GAGGDGGRGS 300 SPPATWPGYG WGAPPPWDPS R
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AC120527 | 0.0 | AC120527.3 Oryza sativa Japonica Group cultivar Nipponbare chromosome 11 clone OSJNBa0011J22 map R10571S, complete sequence. |
GenBank | AC147812 | 0.0 | AC147812.2 Oryza sativa Japonica Group cultivar Nipponbare chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence. |
GenBank | AP014967 | 0.0 | AP014967.1 Oryza sativa Japonica Group DNA, chromosome 11, cultivar: Nipponbare, complete sequence. |
GenBank | CP012619 | 0.0 | CP012619.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 11 sequence. |