 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
ORGLA09G0112900.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
bHLH |
| Protein Properties |
Length: 398aa MW: 41670.6 Da PI: 9.147 |
| Description |
bHLH family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ORGLA09G0112900.1 | genome | AGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | HLH | 39.9 | 7.5e-13 | 328 | 373 | 6 | 55 |
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+++Er RR ri +++ +L+el+P+ k + a++L +Av+YIk+Lq
ORGLA09G0112900.1 328 SIAERVRRTRISERIRKLQELVPNM----EKQTNTADMLDLAVDYIKELQ 373
689*********************7....467*****************9 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 398 aa
Download sequence Send
to blast |
MYGAPVSKDL SLQPAGVRTP PQMSSPGLLR YRSAPSTLLG EVCGDFVLPG GGGGGQLQLQ 60
QQRPGSPDHA ADTVLARFLA GHGGHDNKPP RPAAHFAPPE DSMASHQQQL MYQSHQQQQQ 120
MASAMEGLYR TVSSGGTEST AAAAGNSLLR QSSSPAGFLN HLTMDNGYGN MLRAGMGGGG 180
GGGDPRLKGQ LSFSSRQGSV MSQISEMGSE DEELAGGGGS PEAGSNGGGA ARGGYGGGYA 240
MGSSAWEEPS PPATSLLPDS SLPSKRPRDD LPRQLSLPAA SKNSSKPPSS ASAAASPEMA 300
AIEKFLQFQD AVPCKIRAKR GCATHPRSIA ERVRRTRISE RIRKLQELVP NMEKQTNTAD 360
MLDLAVDYIK ELQKQVKVLN DSRSSCTCSA SKQKHFAG
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK120902 | 0.0 | AK120902.1 Oryza sativa Japonica Group cDNA clone:J023030N23, full insert sequence. |
