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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORGLA09G0101900.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
bHLH |
Protein Properties |
Length: 356aa MW: 37537.3 Da PI: 6.351 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORGLA09G0101900.1 | genome | AGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 43.6 | 5.4e-14 | 137 | 188 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+r++h ++Er+RR+++N+ ++ Lr+l+P++ ++++ + a+i+ A++++k+L+
ORGLA09G0101900.1 137 QRMTHIAVERNRRKQMNEYLAVLRSLMPPS---YAQRGDQASIVGGAINFVKELE 188
79****************************...*******************995 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 356 aa
Download sequence Send
to blast |
MALEAVLLSR GDLFGRRRCA MEGGGGGGGG GGWSSPFSGF EGVMDLDGGN WDAAACSSML 60 LHGFQEIEIP AAAAAAAAMA PPPPPVEPAN CAENAGGVGD HQEDQAAVAA AATAVQAGRR 120 KRRRARAAKN KEEVESQRMT HIAVERNRRK QMNEYLAVLR SLMPPSYAQR GDQASIVGGA 180 INFVKELEQL LQSLEARKSS RQCAAHDAAA AAAPFASFFT FPQYSMSAAT AAAPVAPVVN 240 EVHGRDDGGA GTAEAEASGS KPSAVADVEV TMVESHANLR VLSRRRPRQL LRLVVALQGH 300 RLTVLHLNMT SAGHMVLYSF SLKVEDDCQL TSVDEIATAA HQIIEKIQEE QGCSLD
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 119 | 123 | RKRRR |
2 | 137 | 148 | RMTHIAVERNRR |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | CP012617 | 0.0 | CP012617.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 9 sequence. |