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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORGLA09G0096500.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
bHLH |
Protein Properties |
Length: 236aa MW: 25347.7 Da PI: 6.8057 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORGLA09G0096500.1 | genome | AGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 25.9 | 1.8e-08 | 156 | 196 | 9 | 54 |
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
r RR+ri +++ L++l+P +K++ a++L +A++Y+k L
ORGLA09G0096500.1 156 ARLRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 196
699*****************87.....8****************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 236 aa
Download sequence Send
to blast |
MDFDLFNSYP ESQLDLMSTM LQLEQLTALS DQSLFMAAPT SPPVSPMGTP SPQFSPPPQM 60 SVTTTTAGGG YQDQYNSMPA TYGAGAGVHQ LDFAMSSPGS DSGAPQGSSS SSSSEAMREM 120 IFHIAALQPV EIDPEAVRPP KRRNVRISKD PQSVAARLRR ERISERIRIL QRLVPGGTKM 180 DTASMLDEAI HYVKFLKSQV QSLERAAAAT GAAAHRAAAF GAAYPAALPM QHHAPW
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 137 | 142 | RPPKRR |
2 | 156 | 161 | RLRRER |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK060477 | 0.0 | AK060477.1 Oryza sativa Japonica Group cDNA clone:001-012-F09, full insert sequence. |
GenBank | AK070458 | 0.0 | AK070458.1 Oryza sativa Japonica Group cDNA clone:J023048E05, full insert sequence. |
GenBank | AP005655 | 0.0 | AP005655.2 Oryza sativa Japonica Group genomic DNA, chromosome 9, PAC clone:P0025H07. |
GenBank | AP006057 | 0.0 | AP006057.3 Oryza sativa Japonica Group genomic DNA, chromosome 9, BAC clone:B1342C04. |
GenBank | AP014965 | 0.0 | AP014965.1 Oryza sativa Japonica Group DNA, chromosome 9, cultivar: Nipponbare, complete sequence. |