 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
ORGLA08G0095200.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
|
| Family |
NAC |
| Protein Properties |
Length: 358aa MW: 40212.2 Da PI: 4.866 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ORGLA08G0095200.1 | genome | AGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 62 | 1.9e-19 | 9 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkd 89
l+pGf+F+P+de+lv+++L + +++ +++l + + d +v Pw+L ++ +++e++ yf +++d + r+ r+ + +g+W ++ +
ORGLA08G0095200.1 9 LTPGFKFEPSDEQLVQFFLLPYLRELPVPLGGLVIRDDPRSVPPWKLFaRNGRGDEEDAYFLAPADGEG----RQARTCDggRGRWITQRLE 96
579***************************8888888**********8334445666779988887753....555543323899**99999 PP
NAM 90 kevlsk.......kgelvglkktLvfykgrapkgektdWvmheyrl 128
++ + ++++v k+ L ++ g+ + g +t Wvmhey++
ORGLA08G0095200.1 97 RTGNLRlaggggsGEAVVFEKHRLNYHAGEGRCG-STGWVMHEYAV 141
988887889888777789*********9999997.9********86 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 358 aa
Download sequence Send
to blast |
MAAAKMAGLT PGFKFEPSDE QLVQFFLLPY LRELPVPLGG LVIRDDPRSV PPWKLFARNG 60
RGDEEDAYFL APADGEGRQA RTCDGGRGRW ITQRLERTGN LRLAGGGGSG EAVVFEKHRL 120
NYHAGEGRCG STGWVMHEYA VVKPAALGAR HRACHIAFTG HGQKRKRVPD GYVDVEDDGS 180
KASTNAAAAV PPSSTAAMSA CPSNVTYNQG CHISPEQSIE QHFPAEHNNI QIQQQAYYQS 240
QDHEQCQYSD EEKYLLQQIK QEQYYYNQQN CFLPGQGNQE LYYNDEQQQI FSLPEHQCSQ 300
EQYCHHDDQQ DCVLPEQHSQ ELHGYNNEEQ GYLLPPEPID QEEQALFVGG EPQMNNNP
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AP004759 | 0.0 | AP004759.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, PAC clone:P0670E08. |
| GenBank | AP005490 | 0.0 | AP005490.3 Oryza sativa Japonica Group genomic DNA, chromosome 8, BAC clone:OSJNBa0049I01. |
| GenBank | AP014964 | 0.0 | AP014964.1 Oryza sativa Japonica Group DNA, chromosome 8, cultivar: Nipponbare, complete sequence. |
