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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORGLA08G0051100.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
NAC |
Protein Properties |
Length: 293aa MW: 32231.7 Da PI: 8.5858 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORGLA08G0051100.1 | genome | AGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 160.1 | 9e-50 | 11 | 158 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.....lelee.....vikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgy 82
+ppGfrFhP+d+elv +yL +k+++ +i +vd++k+ePwdLp ++ + kewyfFs rd+kyatg+r+nrat+sgy
ORGLA08G0051100.1 11 MPPGFRFHPRDDELVLDYLLHKLAAGGrgggvY---GggggvAIVDVDLNKCEPWDLPDAACVGGKEWYFFSLRDRKYATGHRTNRATRSGY 99
79********************99888555541...1455546***************7666789*************************** PP
NAM 83 Wkatgkdkevlsk......kgel........vglkktLvfykgrapkgektdWvmheyrle 129
Wkatgkd++++++ + vg++ktLvfy+grapkg+kt+Wvmhe+rle
ORGLA08G0051100.1 100 WKATGKDRSITRRssissgE--PsssaaaaaVGMRKTLVFYRGRAPKGRKTEWVMHEFRLE 158
************86666550..155566666***************************985 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 293 aa
Download sequence Send
to blast |
MSFIGMVEAR MPPGFRFHPR DDELVLDYLL HKLAAGGRGG GVYGGGGGVA IVDVDLNKCE 60 PWDLPDAACV GGKEWYFFSL RDRKYATGHR TNRATRSGYW KATGKDRSIT RRSSISSGEP 120 SSSAAAAAVG MRKTLVFYRG RAPKGRKTEW VMHEFRLEPQ PLHLKEDWVL CRVFYKTRQT 180 IPSPSSEEAV TLPNELDLPA TPSLPPLIDA YIAFDSAPMT TPSMVGSYEQ VSCFSGLPAL 240 PMKGSISFGD LLAMDTSAEK KAIRVLHNSN TAKLELSPDW GQESGLSQMW NPQ
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 2e-43 | 6 | 176 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-43 | 6 | 176 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-43 | 6 | 176 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-43 | 6 | 176 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
4dul_A | 2e-43 | 6 | 176 | 12 | 165 | NAC domain-containing protein 19 |
4dul_B | 2e-43 | 6 | 176 | 12 | 165 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that mediates auxin signaling to promote lateral root development. Activates the expression of two downstream auxin-responsive genes, DBP and AIR3. {ECO:0000269|PubMed:11114891}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Induced by auxin. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK120197 | 0.0 | AK120197.1 Oryza sativa Japonica Group cDNA clone:J013036M14, full insert sequence. |
Publications
? help Back to Top |
- Le Hénanff G, et al.
Grapevine NAC1 transcription factor as a convergent node in developmental processes, abiotic stresses, and necrotrophic/biotrophic pathogen tolerance. J. Exp. Bot., 2013. 64(16): p. 4877-93 [PMID:24043850] - Ding Y, et al.
Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] - Xiao D, et al.
SENESCENCE-SUPPRESSED PROTEIN PHOSPHATASE Directly Interacts with the Cytoplasmic Domain of SENESCENCE-ASSOCIATED RECEPTOR-LIKE KINASE and Negatively Regulates Leaf Senescence in Arabidopsis. Plant Physiol., 2015. 169(2): p. 1275-91 [PMID:26304848] - Huo X,Wang C,Teng Y,Liu X
Identification of miRNAs associated with dark-induced senescence in Arabidopsis. BMC Plant Biol., 2015. 15: p. 266 [PMID:26530097] - Chen X, et al.
Auxin-Independent NAC Pathway Acts in Response to Explant-Specific Wounding and Promotes Root Tip Emergence during de Novo Root Organogenesis in Arabidopsis. Plant Physiol., 2016. 170(4): p. 2136-45 [PMID:26850273] - Liu C,Wang B,Li Z,Peng Z,Zhang J
TsNAC1 Is a Key Transcription Factor in Abiotic Stress Resistance and Growth. Plant Physiol., 2018. 176(1): p. 742-756 [PMID:29122985]
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