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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORGLA07G0264000.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
GeBP |
Protein Properties |
Length: 253aa MW: 26817.2 Da PI: 4.7336 |
Description |
GeBP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORGLA07G0264000.1 | genome | AGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF573 | 108.5 | 4.6e-34 | 85 | 184 | 2 | 97 |
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk..spsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkif 89
lfqrlw+eeDeiv+L+G+ +f+a +g+ +++ d+d fye +++++++ +sksqlveK+rrLK+K++++v++ + sg+ +sf+++h+q if
ORGLA07G0264000.1 85 LFQRLWTEEDEIVILRGFAEFTAARGTafASHQyDTDPFYEDMRGRLQLGFSKSQLVEKLRRLKRKYRNCVSRlRGSGSAFSFRSPHEQAIF 176
79************************99877778***************************************8889*************** PP
DUF573 90 elskkiWg 97
e+++ iW+
ORGLA07G0264000.1 177 EIARNIWR 184
*******8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 253 aa
Download sequence Send
to blast |
MLPAGGYPSA AAISFPDADV DDDSDDGDFT DAPLIDPSDP TFPNPASSSA AAAAMTTPAA 60 AGGGSGSGSV GGVGSSSGGG ERRPLFQRLW TEEDEIVILR GFAEFTAARG TAFASHQYDT 120 DPFYEDMRGR LQLGFSKSQL VEKLRRLKRK YRNCVSRLRG SGSAFSFRSP HEQAIFEIAR 180 NIWRPTNKHG RDGDSDDEDA TQVTPAPVPV NTSPNDHNAN YSDNGGLGTP QIAGHATSAG 240 CFRCRQELLD ASV
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AK068356 | 0.0 | AK068356.1 Oryza sativa Japonica Group cDNA clone:J013146D06, full insert sequence. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G04930.2 | 7e-36 | DNA-binding storekeeper protein-related transcriptional regulator |