PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORGLA07G0211700.1
Organism
Oryza glaberrima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family EIL
Protein Properties Length: 592aa    MW: 65048.8 Da    PI: 5.2943
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORGLA07G0211700.1genomeAGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3501.63.8e-153804681354
                        XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
               EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaa....tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegas 88 
                        eel++rmw+d++++krlke ++++ +++++a     g +++++s+eqarrkkmsraQDgiLkYMlk+mevcnaqGfvYgiipekgkpv+gas
  ORGLA07G0211700.1  80 EELERRMWRDRVRHKRLKELQQSRAGRESRAgdagGGGRQQRQSQEQARRKKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPEKGKPVSGAS 171
                        8**********************99999988888888899**************************************************** PP

                        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HH CS
               EIN3  89 dsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelw 180
                        d+Lr+WWkekv+fdrngpaai+kyqa+n++++ + +   ++ + +hsl+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWWP+G+e+w
  ORGLA07G0211700.1 172 DNLRSWWKEKVRFDRNGPAAIAKYQADNAVPGCDGDAGGAAPAGPHSLHELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPEGSEAW 263
                        **********************************999888**************************************************** PP

                        HHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX..XXXXXXX CS
               EIN3 181 wgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah..ssslrkq 270
                        w+e+g++k+ g+ppykkphdlkkawkv+vLtavikhmsp+++++r+l+rqsk+lqdkm+ake  ++l+vl+qee+++ ++++   ++    +
  ORGLA07G0211700.1 264 WPEAGVPKELGPPPYKKPHDLKKAWKVAVLTAVIKHMSPDVDKVRRLVRQSKCLQDKMTAKEIVTWLAVLKQEEDLYLKLHPGalPPP--LS 353
                        **********************************************************************************965444..47 PP

                        XXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX................................XXXXXXXXXXXXXXXXXXXXX......X CS
               EIN3 271 spkvtlsceqkedvegkkeskikhvqavktta................................gfpvvrkrkkkpsesakvsskevsrtcq 330
                        + ++++s + ++dveg +  +  + + +k+++                                ++++++kr  +p+   +  s+  ++tc 
  ORGLA07G0211700.1 354 AASFNASVSGEYDVEGVDGDEAGNNNLQKAQNdatafmdltttmdaalsnnkflimplmkeeaiDVDFIQKRS-EPELMLSSDSHARVYTCG 444
                        8899***********5555554555555555556899***********************************9.55555555666678**** PP

                        XXXXXX.XXXXXXXXXXXXXXXXX CS
               EIN3 331 ssqfrgsetelifadknsisqney 354
                        + q+++s+++l+f d+n+++ ++y
  ORGLA07G0211700.1 445 NVQCPHSNYALGFLDRNERNAHQY 468
                        **********************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048736.8E-12980337No hitNo description
Gene3DG3DSA:1.10.3180.101.1E-70216345IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167683.27E-58217340IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 592 aa     Download sequence    Send to blast
MMGAAVTMVD RRMAFAAEAD VDSKAAFGFF GGECFVGEGD LVNPAPPPQQ QQQVHEGGFA  60
AEDESDGDDD DDDDDVDDIE ELERRMWRDR VRHKRLKELQ QSRAGRESRA GDAGGGGRQQ  120
RQSQEQARRK KMSRAQDGIL KYMLKMMEVC NAQGFVYGII PEKGKPVSGA SDNLRSWWKE  180
KVRFDRNGPA AIAKYQADNA VPGCDGDAGG AAPAGPHSLH ELQDTTLGSL LSALMQHCDP  240
PQRRFPLEKG VPPPWWPEGS EAWWPEAGVP KELGPPPYKK PHDLKKAWKV AVLTAVIKHM  300
SPDVDKVRRL VRQSKCLQDK MTAKEIVTWL AVLKQEEDLY LKLHPGALPP PLSAASFNAS  360
VSGEYDVEGV DGDEAGNNNL QKAQNDATAF MDLTTTMDAA LSNNKFLIMP LMKEEAIDVD  420
FIQKRSEPEL MLSSDSHARV YTCGNVQCPH SNYALGFLDR NERNAHQYAC KHNAAAAAAE  480
SKPPPPHIFE PLGSFDFDLP VDGQRCLAGL MTMYDNDVAA ATQMHHHHHQ QQQANFFIRD  540
DAPFGGDVAA TAAAAPEFRF SSNFNVSGGG AVDYGGAMQQ PPAKYAGSNW FY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A4e-702143451132Protein ETHYLENE INSENSITIVE 3
4zds_B4e-702143451132Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:19798512, PubMed:25995326). Involved in wound signaling by binding specifically to the DNA sequence 5'-ATGTACCT-3' found in the promoter of some wound-inducible genes (PubMed:19798512). Required for ethylene-promoted coleoptile elongation (PubMed:25995326). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:19798512, ECO:0000269|PubMed:25995326}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapORGLA07G0211700.1
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by wounding and metyhl jasmonate. {ECO:0000269|PubMed:19798512}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0126150.0CP012615.1 Oryza sativa Indica Group cultivar RP Bio-226 chromosome 7 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015646574.10.0ETHYLENE INSENSITIVE 3-like 1 protein
SwissprotQ8W3L90.0EIL2_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 2
TrEMBLI1QDC50.0I1QDC5_ORYGL; Uncharacterized protein
STRINGORGLA07G0211700.10.0(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.11e-138ETHYLENE-INSENSITIVE3-like 1
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Yilmaz A, et al.
    GRASSIUS: a platform for comparative regulatory genomics across the grasses.
    Plant Physiol., 2009. 149(1): p. 171-80
    [PMID:18987217]
  3. Yang C, et al.
    MAOHUZI6/ETHYLENE INSENSITIVE3-LIKE1 and ETHYLENE INSENSITIVE3-LIKE2 Regulate Ethylene Response of Roots and Coleoptiles and Negatively Affect Salt Tolerance in Rice.
    Plant Physiol., 2015. 169(1): p. 148-65
    [PMID:25995326]