![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
ORGLA07G0156800.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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Family |
GRAS |
Protein Properties |
Length: 602aa MW: 64668.3 Da PI: 5.6196 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
ORGLA07G0156800.1 | genome | AGI | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Ogl&pid=ORGLA07G0156800.1) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 313.6 | 4.3e-96 | 193 | 601 | 2 | 374 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalkl.fsevsPilk 92
+lLlecA+ v+++d +++q+l++ l+elasp+gd q++a+yf+++L arl+ s++++ ++l++ +++++ s +++ + l f+e+sP+
ORGLA07G0156800.1 193 SQLLLECARSVAARDSQRVQQLMWMLNELASPYGDVEQKMASYFLQGLFARLTASGPRTLRTLAAASDRNT-SFDSTRRTALrFQELSPWSS 283
589************************************************************99888744.44444444446********* PP
GRAS 93 fshltaNqaIleavege........ervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesg.....skeeleetgerLakfAe 170
f+h++aN aIle++ + +r Hi+D++ + ++QWp+Ll+aLa+R+ +++p+l iT+v+s++++ ++ ++e+g+r++kfA+
ORGLA07G0156800.1 284 FGHVAANGAILESFLEVaaaassetQRFHILDLSNTFCTQWPTLLEALATRSaDETPHLSITTVVSAAPSaptaaVQRVMREIGQRMEKFAR 375
************8754434455567999************************8889**********988889999999************** PP
GRAS 171 elgvpfefnvlvak.rledleleeLrvkp...gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nse...... 251
+gvpf+f++++++ +l++l+l++L++++ alaVn+v +l ++ ++ + +rd++ +++l P+vv+vve+ead+ +
ORGLA07G0156800.1 376 LMGVPFRFRAVHHSgDLAELDLDALDLREggaTTALAVNCVNSLRGVV--PGRAR-RRDAFAASLRRLDPRVVTVVEEEADLvA-Sdpdass 463
***********8888**************888889************9..55555.59***********************954.44899** PP
GRAS 252 ..........sFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplseka 333
Fl+ f e l+++sa +dsle+++p++s+er +Er gr+iv++v+c +e+ er+et+++W +r+++aGF+pv++se++
ORGLA07G0156800.1 464 ateeggdteaAFLKVFGEGLRFFSAYMDSLEESFPKTSNERLALERG-AGRAIVDLVSCPASESMERRETAASWARRMRSAGFSPVAFSEDV 554
***********************************************.******************************************** PP
GRAS 334 akqaklllrkvksdgyrveee.......sgslvlgWkdrpLvsvSaWr 374
a+++++llr++ +g+++ e + ++l Wk++pLv++SaWr
ORGLA07G0156800.1 555 ADDVRSLLRRYR-EGWSMREAgtddsaaGAGVFLAWKEQPLVWASAWR 601
************.88888866666666455566**************8 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0008356 | Biological Process | asymmetric cell division |
GO:0009956 | Biological Process | radial pattern formation |
GO:0045930 | Biological Process | negative regulation of mitotic cell cycle |
GO:0048366 | Biological Process | leaf development |
GO:0055072 | Biological Process | iron ion homeostasis |
GO:0005634 | Cellular Component | nucleus |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 602 aa
Download sequence Send
to blast |
MDTLFRLVSL QAASEQQQQQ QQSASYNSRS TTSSGSRSSS HQTNASYSYY HHSSNSGGGG 60 GGGGGYYYGG QQPPPSQYYY LEPYQEECGN APHHQLYMDE DFSSSSSSRH FHHGAPVQQQ 120 QPPASSTPTG TAPTPPLSTS STAAGAGHGL FEAADLSFPP DLNLDFSSPA SSSGGGTASS 180 GAVGGGGGGR WASQLLLECA RSVAARDSQR VQQLMWMLNE LASPYGDVEQ KMASYFLQGL 240 FARLTASGPR TLRTLAAASD RNTSFDSTRR TALRFQELSP WSSFGHVAAN GAILESFLEV 300 AAAASSETQR FHILDLSNTF CTQWPTLLEA LATRSADETP HLSITTVVSA APSAPTAAVQ 360 RVMREIGQRM EKFARLMGVP FRFRAVHHSG DLAELDLDAL DLREGGATTA LAVNCVNSLR 420 GVVPGRARRR DAFAASLRRL DPRVVTVVEE EADLVASDPD ASSATEEGGD TEAAFLKVFG 480 EGLRFFSAYM DSLEESFPKT SNERLALERG AGRAIVDLVS CPASESMERR ETAASWARRM 540 RSAGFSPVAF SEDVADDVRS LLRRYREGWS MREAGTDDSA AGAGVFLAWK EQPLVWASAW 600 RP
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor required for the asymmetric cell division involved in radial pattern formation in roots. Essential for both cell division and cell specification (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AP003985 | 0.0 | AP003985.4 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1047_C01. |
GenBank | AP005437 | 0.0 | AP005437.3 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1113_E01. |
GenBank | AP014963 | 0.0 | AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence. |