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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
ORGLA07G0064400.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
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| Family |
NAC |
| Protein Properties |
Length: 276aa MW: 30860.9 Da PI: 6.4107 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| ORGLA07G0064400.1 | genome | AGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 165.6 | 1.7e-51 | 17 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92
lppGfrFhPtdeelv +yL+++++g+ ++ +i+e+d+y+++PwdLp+++ +++ewyfF++rd+ky++g+r+nra++sgyWkatg dk+v
ORGLA07G0064400.1 17 LPPGFRFHPTDEELVAHYLCPRAAGRAAPV-PIIAELDLYRHDPWDLPHRALFGRREWYFFTPRDRKYPNGSRPNRAAASGYWKATGADKPV 107
79*************************999.88***************87778999************************************ PP
NAM 93 lskkgelvglkktLvfykgrapkgektdWvmheyrl 128
l+ +g++ g+kk Lvfy+g+ p+g+kt+W+mheyrl
ORGLA07G0064400.1 108 LH-NGRTAGIKKALVFYHGKPPRGVKTEWIMHEYRL 142
**.999****************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 276 aa
Download sequence Send
to blast |
MAAAKRRVRD AEADLNLPPG FRFHPTDEEL VAHYLCPRAA GRAAPVPIIA ELDLYRHDPW 60
DLPHRALFGR REWYFFTPRD RKYPNGSRPN RAAASGYWKA TGADKPVLHN GRTAGIKKAL 120
VFYHGKPPRG VKTEWIMHEY RLAKKGGAAA AAGAGALRLD DWVLCRLYNK KNEWEKMQSR 180
KEEEEAMAAA QSWGETRTPE SEVVDSDAFP EMDYSLPAAS FDDALLPKEE ARDDDWLMGM 240
SLDDLQGLGS LLQADDLSML APPPAAKTEP LGAPFF
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor involved in stress response. {ECO:0000250|UniProtKB:Q7F2L3}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by salt and cold stresses (PubMed:18813954, PubMed:20632034). Induced by dehydration and methyl jasmonate (PubMed:20632034). {ECO:0000269|PubMed:18813954, ECO:0000269|PubMed:20632034}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | AB028182 | 0.0 | AB028182.1 Oryza sativa mRNA for OsNAC3 protein, complete cds. |
| GenBank | AK073667 | 0.0 | AK073667.1 Oryza sativa Japonica Group cDNA clone:J033052E11, full insert sequence. |
| GenBank | AP004572 | 0.0 | AP004572.5 Oryza sativa Japonica Group genomic DNA, chromosome 7, PAC clone:P0668C05. |
| GenBank | AP005516 | 0.0 | AP005516.5 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OSJNBa0066H10. |
| GenBank | AP014963 | 0.0 | AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence. |
| Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Takasaki H, et al.
The abiotic stress-responsive NAC-type transcription factor OsNAC5 regulates stress-inducible genes and stress tolerance in rice.
Mol. Genet. Genomics, 2010. 284(3): p. 173-83
[PMID:20632034] - Ghosh T,Rai M,Tyagi W,Challam C
Seedling stage low temperature response in tolerant and susceptible rice genotypes suggests role of relative water content and members of OsSNAC gene family.
Plant Signal Behav, 2016. 11(5): p. e1138192
[PMID:26829663] - Rahman H,Ramanathan V,Nallathambi J,Duraialagaraja S,Muthurajan R
Over-expression of a NAC 67 transcription factor from finger millet (Eleusine coracana L.) confers tolerance against salinity and drought stress in rice.
BMC Biotechnol., 2016. 16 Suppl 1: p. 35
[PMID:27213684]
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