PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID ORGLA07G0063300.1
Organism
Oryza glaberrima
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family EIL
Protein Properties Length: 361aa    MW: 38559.5 Da    PI: 6.4509
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
ORGLA07G0063300.1genomeAGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN342.91.1e-13106197152232
                        S.SSSSS-..TTS--TTT--...HHHH---S--HHHHHHT--TT--......-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSS CS
               EIN3 152 m.qhcdpp..qrrfplekgv...epPWWPtGkelwwgelglskdqg.....tppykkphdlkkawkvsvLtavikhmsptieeirelerqsk 232
                        m q c+pp   rr     ++   +pPWWP+ +e wwg+  +++  g     + p+  p+ l ka kv+vL av++h++p++ ++   + +s+
  ORGLA07G0063300.1 106 MaQECTPPlvARRDRKSGATpppPPPWWPKAEEPWWGTEVAAHLRGrrmatPVPFASPRRLAKAEKVAVLVAVVRHVAPDFGRLAAAAGRSR 197
                        44888888553554555555111578***********6654444447899888****************************99888776664 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.3180.109.5E-3585223IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167688.24E-4088218IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
PfamPF048731.7E-1489198No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    Send to blast
MASSSSGKRV SSSSTSSHQQ HAKRRRRAPG DELSQTHGVA RNAVAAMPMV GVAPLMLSPV  60
TMQAQLLCYV AMPMAPVAGG GGGGVPLAAA LCRLRNGTLE RMVREMAQEC TPPLVARRDR  120
KSGATPPPPP PWWPKAEEPW WGTEVAAHLR GRRMATPVPF ASPRRLAKAE KVAVLVAVVR  180
HVAPDFGRLA AAAGRSRLTE LESSIWESAL RGERKRRYVV MPSFILLPPP PPPPPPPQHA  240
HSAESAAAHA GPEPESADQT AVDFSVSGED TVTTGPELEQ LVGDGNGATV EGEGQKTEDS  300
PVPPLLEQHG GEDHDHHRQH GGFSGEVSGA APEDVDWFDY DEVLRGLDEL EIPSFFGGYY  360
I
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A6e-129021311128ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapORGLA07G0063300.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0037400.0AP003740.2 Oryza sativa Japonica Group genomic DNA, chromosome 7, BAC clone:OJ1118_B03.
GenBankAP0149630.0AP014963.1 Oryza sativa Japonica Group DNA, chromosome 7, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015645905.10.0putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLI1Q9410.0I1Q941_ORYGL; Uncharacterized protein
STRINGORGLA07G0063300.10.0(Oryza glaberrima)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1804988